Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COX4I2Q96KJ9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COX4I2Q96KJ9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.66■□□□□ 0.9
COX4I2Q96KJ9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COX4I2Q96KJ9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COX4I2Q96KJ9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
COX4I2Q96KJ9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.66■□□□□ 0.9
COX4I2Q96KJ9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.66■□□□□ 0.9
COX4I2Q96KJ9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COX4I2Q96KJ9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.66■□□□□ 0.9
COX4I2Q96KJ9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COX4I2Q96KJ9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COX4I2Q96KJ9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COX4I2Q96KJ9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COX4I2Q96KJ9 GUSBP5-202ENST00000510805 1989 ntBASIC20.65■□□□□ 0.9
COX4I2Q96KJ9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
COX4I2Q96KJ9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COX4I2Q96KJ9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COX4I2Q96KJ9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COX4I2Q96KJ9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COX4I2Q96KJ9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.65■□□□□ 0.9
COX4I2Q96KJ9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.65■□□□□ 0.9
COX4I2Q96KJ9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COX4I2Q96KJ9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COX4I2Q96KJ9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COX4I2Q96KJ9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COX4I2Q96KJ9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
COX4I2Q96KJ9 ECEL1P1-201ENST00000373592 1742 ntBASIC20.64■□□□□ 0.9
COX4I2Q96KJ9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COX4I2Q96KJ9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
COX4I2Q96KJ9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COX4I2Q96KJ9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COX4I2Q96KJ9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
COX4I2Q96KJ9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COX4I2Q96KJ9 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COX4I2Q96KJ9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
COX4I2Q96KJ9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COX4I2Q96KJ9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COX4I2Q96KJ9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
COX4I2Q96KJ9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COX4I2Q96KJ9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
COX4I2Q96KJ9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.63■□□□□ 0.89
COX4I2Q96KJ9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COX4I2Q96KJ9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COX4I2Q96KJ9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COX4I2Q96KJ9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COX4I2Q96KJ9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COX4I2Q96KJ9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
COX4I2Q96KJ9 AC008406.3-201ENST00000620001 1374 ntBASIC20.62■□□□□ 0.89
COX4I2Q96KJ9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COX4I2Q96KJ9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.62■□□□□ 0.89
COX4I2Q96KJ9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COX4I2Q96KJ9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COX4I2Q96KJ9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COX4I2Q96KJ9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COX4I2Q96KJ9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.61■□□□□ 0.89
COX4I2Q96KJ9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.6■□□□□ 0.89
COX4I2Q96KJ9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COX4I2Q96KJ9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
COX4I2Q96KJ9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COX4I2Q96KJ9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
COX4I2Q96KJ9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
COX4I2Q96KJ9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COX4I2Q96KJ9 AC239859.2-201ENST00000444165 318 ntBASIC20.6■□□□□ 0.89
COX4I2Q96KJ9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.6■□□□□ 0.89
COX4I2Q96KJ9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.6■□□□□ 0.89
COX4I2Q96KJ9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.6■□□□□ 0.89
COX4I2Q96KJ9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
COX4I2Q96KJ9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COX4I2Q96KJ9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COX4I2Q96KJ9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
COX4I2Q96KJ9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COX4I2Q96KJ9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COX4I2Q96KJ9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
COX4I2Q96KJ9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.59■□□□□ 0.89
COX4I2Q96KJ9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COX4I2Q96KJ9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms