Protein–RNA interactions for Protein: Q96JP9

CDHR1, Cadherin-related family member 1, humanhuman

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1Q96JP9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
CDHR1Q96JP9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CDHR1Q96JP9 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CDHR1Q96JP9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CDHR1Q96JP9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CDHR1Q96JP9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CDHR1Q96JP9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CDHR1Q96JP9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
CDHR1Q96JP9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.37■■□□□ 1.65
CDHR1Q96JP9 pRNA.6-201ENST00000610482 90 ntBASIC25.37■■□□□ 1.65
CDHR1Q96JP9 pRNA.5-201ENST00000612139 90 ntBASIC25.37■■□□□ 1.65
CDHR1Q96JP9 pRNA.11-201ENST00000618423 90 ntBASIC25.37■■□□□ 1.65
CDHR1Q96JP9 pRNA.13-201ENST00000619112 90 ntBASIC25.37■■□□□ 1.65
CDHR1Q96JP9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CDHR1Q96JP9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.37■■□□□ 1.65
CDHR1Q96JP9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
CDHR1Q96JP9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.36■■□□□ 1.65
CDHR1Q96JP9 AC027682.1-201ENST00000562846 899 ntBASIC25.36■■□□□ 1.65
CDHR1Q96JP9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.36■■□□□ 1.65
CDHR1Q96JP9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CDHR1Q96JP9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.35■■□□□ 1.65
CDHR1Q96JP9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.35■■□□□ 1.65
CDHR1Q96JP9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDHR1Q96JP9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.35■■□□□ 1.65
CDHR1Q96JP9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CDHR1Q96JP9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CDHR1Q96JP9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CDHR1Q96JP9 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDHR1Q96JP9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
CDHR1Q96JP9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDHR1Q96JP9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDHR1Q96JP9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
CDHR1Q96JP9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.34■■□□□ 1.65
CDHR1Q96JP9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
CDHR1Q96JP9 RASA4CP-201ENST00000424092 1398 ntBASIC25.33■■□□□ 1.65
CDHR1Q96JP9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDHR1Q96JP9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDHR1Q96JP9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.33■■□□□ 1.65
CDHR1Q96JP9 MIR935-201ENST00000401179 91 ntBASIC25.33■■□□□ 1.65
CDHR1Q96JP9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.33■■□□□ 1.65
CDHR1Q96JP9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.33■■□□□ 1.65
CDHR1Q96JP9 DUX4L4-201ENST00000566884 1269 ntBASIC25.33■■□□□ 1.65
CDHR1Q96JP9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDHR1Q96JP9 AC004812.2-201ENST00000611079 2094 ntBASIC25.33■■□□□ 1.65
CDHR1Q96JP9 AC144652.1-201ENST00000609974 1624 ntBASIC25.33■■□□□ 1.65
CDHR1Q96JP9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDHR1Q96JP9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDHR1Q96JP9 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.32■■□□□ 1.64
CDHR1Q96JP9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.32■■□□□ 1.64
CDHR1Q96JP9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CDHR1Q96JP9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.32■■□□□ 1.64
CDHR1Q96JP9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.32■■□□□ 1.64
CDHR1Q96JP9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
CDHR1Q96JP9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
CDHR1Q96JP9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDHR1Q96JP9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CDHR1Q96JP9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDHR1Q96JP9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDHR1Q96JP9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDHR1Q96JP9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
CDHR1Q96JP9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.31■■□□□ 1.64
CDHR1Q96JP9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
CDHR1Q96JP9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDHR1Q96JP9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
CDHR1Q96JP9 BX842568.3-201ENST00000418104 571 ntBASIC25.3■■□□□ 1.64
CDHR1Q96JP9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.3■■□□□ 1.64
CDHR1Q96JP9 AL499627.2-201ENST00000606283 725 ntBASIC25.3■■□□□ 1.64
CDHR1Q96JP9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.3■■□□□ 1.64
CDHR1Q96JP9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.3■■□□□ 1.64
CDHR1Q96JP9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDHR1Q96JP9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDHR1Q96JP9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDHR1Q96JP9 LINC01529-204ENST00000636474 1715 ntBASIC25.29■■□□□ 1.64
CDHR1Q96JP9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
CDHR1Q96JP9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDHR1Q96JP9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDHR1Q96JP9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.29■■□□□ 1.64
CDHR1Q96JP9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.29■■□□□ 1.64
CDHR1Q96JP9 AC233992.3-201ENST00000607491 485 ntBASIC25.29■■□□□ 1.64
CDHR1Q96JP9 CA15P2-201ENST00000611168 834 ntBASIC25.29■■□□□ 1.64
CDHR1Q96JP9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDHR1Q96JP9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.29■■□□□ 1.64
CDHR1Q96JP9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CDHR1Q96JP9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CDHR1Q96JP9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.28■■□□□ 1.64
CDHR1Q96JP9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
CDHR1Q96JP9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.28■■□□□ 1.64
CDHR1Q96JP9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CDHR1Q96JP9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.28■■□□□ 1.64
CDHR1Q96JP9 ZNRF2P3-201ENST00000424200 374 ntBASIC25.28■■□□□ 1.64
CDHR1Q96JP9 AC008764.7-201ENST00000593779 1081 ntBASIC25.28■■□□□ 1.64
CDHR1Q96JP9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CDHR1Q96JP9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.28■■□□□ 1.64
CDHR1Q96JP9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CDHR1Q96JP9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CDHR1Q96JP9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
CDHR1Q96JP9 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CDHR1Q96JP9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CDHR1Q96JP9 AC105265.2-201ENST00000467189 838 ntBASIC25.27■■□□□ 1.64
CDHR1Q96JP9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms