Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.55■■□□□ 1.2
NAF1Q96HR8 ABCB10P4-201ENST00000566803 2184 ntBASIC22.55■■□□□ 1.2
NAF1Q96HR8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NAF1Q96HR8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.54■■□□□ 1.2
NAF1Q96HR8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.54■■□□□ 1.2
NAF1Q96HR8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
NAF1Q96HR8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NAF1Q96HR8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
NAF1Q96HR8 AC141586.4-201ENST00000624558 1573 ntBASIC22.54■■□□□ 1.2
NAF1Q96HR8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NAF1Q96HR8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.54■■□□□ 1.2
NAF1Q96HR8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
NAF1Q96HR8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
NAF1Q96HR8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NAF1Q96HR8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
NAF1Q96HR8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NAF1Q96HR8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NAF1Q96HR8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NAF1Q96HR8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NAF1Q96HR8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NAF1Q96HR8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NAF1Q96HR8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NAF1Q96HR8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NAF1Q96HR8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NAF1Q96HR8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NAF1Q96HR8 ZNRF2P3-201ENST00000424200 374 ntBASIC22.52■■□□□ 1.2
NAF1Q96HR8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.52■■□□□ 1.2
NAF1Q96HR8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
NAF1Q96HR8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NAF1Q96HR8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NAF1Q96HR8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.52■■□□□ 1.2
NAF1Q96HR8 AC233723.2-201ENST00000623798 2106 ntBASIC22.52■■□□□ 1.2
NAF1Q96HR8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NAF1Q96HR8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
NAF1Q96HR8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NAF1Q96HR8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.52■■□□□ 1.19
NAF1Q96HR8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
NAF1Q96HR8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NAF1Q96HR8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NAF1Q96HR8 RARRES2P6-201ENST00000567333 442 ntBASIC22.51■■□□□ 1.19
NAF1Q96HR8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NAF1Q96HR8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NAF1Q96HR8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
NAF1Q96HR8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.51■■□□□ 1.19
NAF1Q96HR8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NAF1Q96HR8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.5■■□□□ 1.19
NAF1Q96HR8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.5■■□□□ 1.19
NAF1Q96HR8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NAF1Q96HR8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
NAF1Q96HR8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.5■■□□□ 1.19
NAF1Q96HR8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
NAF1Q96HR8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
NAF1Q96HR8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NAF1Q96HR8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.49■■□□□ 1.19
NAF1Q96HR8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
NAF1Q96HR8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NAF1Q96HR8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.49■■□□□ 1.19
NAF1Q96HR8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.49■■□□□ 1.19
NAF1Q96HR8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.49■■□□□ 1.19
NAF1Q96HR8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
NAF1Q96HR8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NAF1Q96HR8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
NAF1Q96HR8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
NAF1Q96HR8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NAF1Q96HR8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NAF1Q96HR8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.48■■□□□ 1.19
NAF1Q96HR8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.48■■□□□ 1.19
NAF1Q96HR8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.48■■□□□ 1.19
NAF1Q96HR8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
NAF1Q96HR8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.48■■□□□ 1.19
NAF1Q96HR8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
NAF1Q96HR8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NAF1Q96HR8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
NAF1Q96HR8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NAF1Q96HR8 PBX2P1-201ENST00000493219 1291 ntBASIC22.47■■□□□ 1.19
NAF1Q96HR8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.47■■□□□ 1.19
NAF1Q96HR8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.47■■□□□ 1.19
NAF1Q96HR8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
NAF1Q96HR8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NAF1Q96HR8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.46■■□□□ 1.19
NAF1Q96HR8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NAF1Q96HR8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
NAF1Q96HR8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NAF1Q96HR8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.46■■□□□ 1.19
NAF1Q96HR8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.46■■□□□ 1.19
NAF1Q96HR8 AC133561.4-201ENST00000566112 224 ntBASIC22.46■■□□□ 1.19
NAF1Q96HR8 AC142381.2-201ENST00000566120 298 ntBASIC22.46■■□□□ 1.19
NAF1Q96HR8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.46■■□□□ 1.19
NAF1Q96HR8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
NAF1Q96HR8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NAF1Q96HR8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NAF1Q96HR8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
NAF1Q96HR8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
NAF1Q96HR8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
NAF1Q96HR8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
NAF1Q96HR8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.45■■□□□ 1.18
NAF1Q96HR8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.45■■□□□ 1.18
NAF1Q96HR8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NAF1Q96HR8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NAF1Q96HR8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms