Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 LINC00543-201ENST00000567234 1845 ntBASIC18.89■□□□□ 0.61
TIMD4Q96H15 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.89■□□□□ 0.61
TIMD4Q96H15 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.89■□□□□ 0.61
TIMD4Q96H15 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.89■□□□□ 0.61
TIMD4Q96H15 AC011298.3-201ENST00000615796 283 ntBASIC18.89■□□□□ 0.61
TIMD4Q96H15 AL355001.2-201ENST00000620617 1191 ntBASIC18.89■□□□□ 0.61
TIMD4Q96H15 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TIMD4Q96H15 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TIMD4Q96H15 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TIMD4Q96H15 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TIMD4Q96H15 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TIMD4Q96H15 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.89■□□□□ 0.61
TIMD4Q96H15 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TIMD4Q96H15 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TIMD4Q96H15 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TIMD4Q96H15 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TIMD4Q96H15 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TIMD4Q96H15 SERBP1P1-201ENST00000396021 1160 ntBASIC18.88■□□□□ 0.61
TIMD4Q96H15 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TIMD4Q96H15 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.88■□□□□ 0.61
TIMD4Q96H15 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.88■□□□□ 0.61
TIMD4Q96H15 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TIMD4Q96H15 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.88■□□□□ 0.61
TIMD4Q96H15 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TIMD4Q96H15 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TIMD4Q96H15 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMD4Q96H15 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TIMD4Q96H15 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMD4Q96H15 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMD4Q96H15 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMD4Q96H15 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMD4Q96H15 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TIMD4Q96H15 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMD4Q96H15 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMD4Q96H15 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMD4Q96H15 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMD4Q96H15 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMD4Q96H15 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.86■□□□□ 0.61
TIMD4Q96H15 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TIMD4Q96H15 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TIMD4Q96H15 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TIMD4Q96H15 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TIMD4Q96H15 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
TIMD4Q96H15 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TIMD4Q96H15 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TIMD4Q96H15 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TIMD4Q96H15 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.86■□□□□ 0.61
TIMD4Q96H15 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TIMD4Q96H15 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.86■□□□□ 0.61
TIMD4Q96H15 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TIMD4Q96H15 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TIMD4Q96H15 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.85■□□□□ 0.61
TIMD4Q96H15 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TIMD4Q96H15 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TIMD4Q96H15 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TIMD4Q96H15 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TIMD4Q96H15 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TIMD4Q96H15 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.85■□□□□ 0.61
TIMD4Q96H15 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.85■□□□□ 0.61
TIMD4Q96H15 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TIMD4Q96H15 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
TIMD4Q96H15 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.85■□□□□ 0.61
TIMD4Q96H15 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TIMD4Q96H15 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TIMD4Q96H15 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.85■□□□□ 0.61
TIMD4Q96H15 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TIMD4Q96H15 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TIMD4Q96H15 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TIMD4Q96H15 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TIMD4Q96H15 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TIMD4Q96H15 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TIMD4Q96H15 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TIMD4Q96H15 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TIMD4Q96H15 MIR4767-201ENST00000582827 78 ntBASIC18.84■□□□□ 0.61
TIMD4Q96H15 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TIMD4Q96H15 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TIMD4Q96H15 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TIMD4Q96H15 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TIMD4Q96H15 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TIMD4Q96H15 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TIMD4Q96H15 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TIMD4Q96H15 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.83■□□□□ 0.6
TIMD4Q96H15 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TIMD4Q96H15 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.83■□□□□ 0.6
TIMD4Q96H15 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TIMD4Q96H15 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.83■□□□□ 0.6
TIMD4Q96H15 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TIMD4Q96H15 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TIMD4Q96H15 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TIMD4Q96H15 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TIMD4Q96H15 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TIMD4Q96H15 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TIMD4Q96H15 AL139125.2-201ENST00000623134 1869 ntBASIC18.82■□□□□ 0.6
TIMD4Q96H15 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TIMD4Q96H15 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TIMD4Q96H15 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TIMD4Q96H15 MIR3181-201ENST00000578512 73 ntBASIC18.82■□□□□ 0.6
TIMD4Q96H15 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.82■□□□□ 0.6
TIMD4Q96H15 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.82■□□□□ 0.6
TIMD4Q96H15 AC136469.2-201ENST00000623944 1028 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms