Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTHRC1Q96CG8 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.96■□□□□ 0.95
CTHRC1Q96CG8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CTHRC1Q96CG8 AL356740.2-201ENST00000601559 647 ntBASIC20.96■□□□□ 0.95
CTHRC1Q96CG8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.96■□□□□ 0.95
CTHRC1Q96CG8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.96■□□□□ 0.95
CTHRC1Q96CG8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.96■□□□□ 0.95
CTHRC1Q96CG8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.96■□□□□ 0.95
CTHRC1Q96CG8 AC144652.1-201ENST00000609974 1624 ntBASIC20.96■□□□□ 0.95
CTHRC1Q96CG8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTHRC1Q96CG8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CTHRC1Q96CG8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTHRC1Q96CG8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.95■□□□□ 0.94
CTHRC1Q96CG8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CTHRC1Q96CG8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTHRC1Q96CG8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTHRC1Q96CG8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.95■□□□□ 0.94
CTHRC1Q96CG8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CTHRC1Q96CG8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTHRC1Q96CG8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CTHRC1Q96CG8 C17orf82-201ENST00000623772 1530 ntBASIC20.94■□□□□ 0.94
CTHRC1Q96CG8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
CTHRC1Q96CG8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.94■□□□□ 0.94
CTHRC1Q96CG8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.94■□□□□ 0.94
CTHRC1Q96CG8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTHRC1Q96CG8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.94■□□□□ 0.94
CTHRC1Q96CG8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.94■□□□□ 0.94
CTHRC1Q96CG8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTHRC1Q96CG8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTHRC1Q96CG8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.94■□□□□ 0.94
CTHRC1Q96CG8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.94■□□□□ 0.94
CTHRC1Q96CG8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTHRC1Q96CG8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CTHRC1Q96CG8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
CTHRC1Q96CG8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTHRC1Q96CG8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTHRC1Q96CG8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.93■□□□□ 0.94
CTHRC1Q96CG8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.93■□□□□ 0.94
CTHRC1Q96CG8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.93■□□□□ 0.94
CTHRC1Q96CG8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CTHRC1Q96CG8 FP325331.1-202ENST00000623531 1380 ntBASIC20.93■□□□□ 0.94
CTHRC1Q96CG8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CTHRC1Q96CG8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTHRC1Q96CG8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTHRC1Q96CG8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTHRC1Q96CG8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTHRC1Q96CG8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTHRC1Q96CG8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.92■□□□□ 0.94
CTHRC1Q96CG8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.92■□□□□ 0.94
CTHRC1Q96CG8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CTHRC1Q96CG8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTHRC1Q96CG8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.92■□□□□ 0.94
CTHRC1Q96CG8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTHRC1Q96CG8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTHRC1Q96CG8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTHRC1Q96CG8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTHRC1Q96CG8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTHRC1Q96CG8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTHRC1Q96CG8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTHRC1Q96CG8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CTHRC1Q96CG8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.91■□□□□ 0.94
CTHRC1Q96CG8 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.91■□□□□ 0.94
CTHRC1Q96CG8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.91■□□□□ 0.94
CTHRC1Q96CG8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.9■□□□□ 0.94
CTHRC1Q96CG8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.9■□□□□ 0.94
CTHRC1Q96CG8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CTHRC1Q96CG8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTHRC1Q96CG8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTHRC1Q96CG8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.9■□□□□ 0.94
CTHRC1Q96CG8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTHRC1Q96CG8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTHRC1Q96CG8 AL512631.2-201ENST00000604634 923 ntBASIC20.9■□□□□ 0.94
CTHRC1Q96CG8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.9■□□□□ 0.94
CTHRC1Q96CG8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTHRC1Q96CG8 AL353803.4-201ENST00000565882 1934 ntBASIC20.9■□□□□ 0.94
CTHRC1Q96CG8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.9■□□□□ 0.94
CTHRC1Q96CG8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTHRC1Q96CG8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CTHRC1Q96CG8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.89■□□□□ 0.94
CTHRC1Q96CG8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CTHRC1Q96CG8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CTHRC1Q96CG8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CTHRC1Q96CG8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CTHRC1Q96CG8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CTHRC1Q96CG8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.89■□□□□ 0.93
CTHRC1Q96CG8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTHRC1Q96CG8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTHRC1Q96CG8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTHRC1Q96CG8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTHRC1Q96CG8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CTHRC1Q96CG8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTHRC1Q96CG8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTHRC1Q96CG8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTHRC1Q96CG8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.88■□□□□ 0.93
CTHRC1Q96CG8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.88■□□□□ 0.93
CTHRC1Q96CG8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.88■□□□□ 0.93
CTHRC1Q96CG8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.88■□□□□ 0.93
CTHRC1Q96CG8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CTHRC1Q96CG8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTHRC1Q96CG8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms