Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE4Q96A23 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.15■□□□□ 0.82
CPNE4Q96A23 AC241377.3-202ENST00000626088 1088 ntBASIC20.15■□□□□ 0.82
CPNE4Q96A23 AC241585.3-202ENST00000628937 1088 ntBASIC20.15■□□□□ 0.82
CPNE4Q96A23 AC245100.8-202ENST00000629247 1058 ntBASIC20.15■□□□□ 0.82
CPNE4Q96A23 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CPNE4Q96A23 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.15■□□□□ 0.82
CPNE4Q96A23 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE4Q96A23 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE4Q96A23 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CPNE4Q96A23 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE4Q96A23 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE4Q96A23 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE4Q96A23 AC093323.1-202ENST00000635031 2045 ntBASIC20.15■□□□□ 0.82
CPNE4Q96A23 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE4Q96A23 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CPNE4Q96A23 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE4Q96A23 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE4Q96A23 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
CPNE4Q96A23 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.14■□□□□ 0.81
CPNE4Q96A23 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE4Q96A23 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE4Q96A23 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.13■□□□□ 0.81
CPNE4Q96A23 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE4Q96A23 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CPNE4Q96A23 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.13■□□□□ 0.81
CPNE4Q96A23 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.13■□□□□ 0.81
CPNE4Q96A23 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CPNE4Q96A23 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.13■□□□□ 0.81
CPNE4Q96A23 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.13■□□□□ 0.81
CPNE4Q96A23 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.13■□□□□ 0.81
CPNE4Q96A23 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE4Q96A23 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.13■□□□□ 0.81
CPNE4Q96A23 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE4Q96A23 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE4Q96A23 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE4Q96A23 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE4Q96A23 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE4Q96A23 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE4Q96A23 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE4Q96A23 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.12■□□□□ 0.81
CPNE4Q96A23 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE4Q96A23 DUX4L19-201ENST00000557448 1267 ntBASIC20.12■□□□□ 0.81
CPNE4Q96A23 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE4Q96A23 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE4Q96A23 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CPNE4Q96A23 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE4Q96A23 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE4Q96A23 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE4Q96A23 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.11■□□□□ 0.81
CPNE4Q96A23 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE4Q96A23 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE4Q96A23 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE4Q96A23 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CPNE4Q96A23 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.11■□□□□ 0.81
CPNE4Q96A23 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE4Q96A23 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CPNE4Q96A23 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CPNE4Q96A23 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE4Q96A23 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.1■□□□□ 0.81
CPNE4Q96A23 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
CPNE4Q96A23 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE4Q96A23 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE4Q96A23 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE4Q96A23 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE4Q96A23 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CPNE4Q96A23 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE4Q96A23 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.09■□□□□ 0.81
CPNE4Q96A23 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE4Q96A23 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CPNE4Q96A23 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.09■□□□□ 0.81
CPNE4Q96A23 AC144652.1-201ENST00000609974 1624 ntBASIC20.09■□□□□ 0.81
CPNE4Q96A23 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE4Q96A23 FP325331.1-202ENST00000623531 1380 ntBASIC20.08■□□□□ 0.81
CPNE4Q96A23 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CPNE4Q96A23 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.08■□□□□ 0.81
CPNE4Q96A23 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CPNE4Q96A23 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE4Q96A23 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE4Q96A23 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE4Q96A23 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE4Q96A23 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
CPNE4Q96A23 AC099791.2-201ENST00000605725 427 ntBASIC20.08■□□□□ 0.81
CPNE4Q96A23 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.08■□□□□ 0.81
CPNE4Q96A23 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.08■□□□□ 0.8
CPNE4Q96A23 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPNE4Q96A23 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
CPNE4Q96A23 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE4Q96A23 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE4Q96A23 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CPNE4Q96A23 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE4Q96A23 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
CPNE4Q96A23 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE4Q96A23 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE4Q96A23 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE4Q96A23 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE4Q96A23 AC009086.3-201ENST00000623486 1008 ntBASIC20.07■□□□□ 0.8
CPNE4Q96A23 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE4Q96A23 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE4Q96A23 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms