Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AL161729.1-201ENST00000604104 1402 ntBASIC18.87■□□□□ 0.61
RTN4IP1Q8WWV3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.87■□□□□ 0.61
RTN4IP1Q8WWV3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4IP1Q8WWV3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4IP1Q8WWV3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4IP1Q8WWV3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4IP1Q8WWV3 GUSBP5-202ENST00000510805 1989 ntBASIC18.86■□□□□ 0.61
RTN4IP1Q8WWV3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RTN4IP1Q8WWV3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.86■□□□□ 0.61
RTN4IP1Q8WWV3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.85■□□□□ 0.61
RTN4IP1Q8WWV3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
RTN4IP1Q8WWV3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RTN4IP1Q8WWV3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
RTN4IP1Q8WWV3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RTN4IP1Q8WWV3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.85■□□□□ 0.61
RTN4IP1Q8WWV3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTN4IP1Q8WWV3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.85■□□□□ 0.61
RTN4IP1Q8WWV3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.85■□□□□ 0.61
RTN4IP1Q8WWV3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RTN4IP1Q8WWV3 LINC00526-201ENST00000581067 1875 ntBASIC18.84■□□□□ 0.61
RTN4IP1Q8WWV3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4IP1Q8WWV3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4IP1Q8WWV3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4IP1Q8WWV3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
RTN4IP1Q8WWV3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.84■□□□□ 0.61
RTN4IP1Q8WWV3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.84■□□□□ 0.61
RTN4IP1Q8WWV3 MIR4508-201ENST00000584178 70 ntBASIC18.84■□□□□ 0.61
RTN4IP1Q8WWV3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4IP1Q8WWV3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.84■□□□□ 0.61
RTN4IP1Q8WWV3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.84■□□□□ 0.61
RTN4IP1Q8WWV3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
RTN4IP1Q8WWV3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RTN4IP1Q8WWV3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTN4IP1Q8WWV3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTN4IP1Q8WWV3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
RTN4IP1Q8WWV3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTN4IP1Q8WWV3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.83■□□□□ 0.6
RTN4IP1Q8WWV3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN4IP1Q8WWV3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN4IP1Q8WWV3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.83■□□□□ 0.6
RTN4IP1Q8WWV3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
RTN4IP1Q8WWV3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.83■□□□□ 0.6
RTN4IP1Q8WWV3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN4IP1Q8WWV3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN4IP1Q8WWV3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN4IP1Q8WWV3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN4IP1Q8WWV3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RTN4IP1Q8WWV3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RTN4IP1Q8WWV3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTN4IP1Q8WWV3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.82■□□□□ 0.6
RTN4IP1Q8WWV3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4IP1Q8WWV3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4IP1Q8WWV3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.82■□□□□ 0.6
RTN4IP1Q8WWV3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4IP1Q8WWV3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4IP1Q8WWV3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4IP1Q8WWV3 AC120024.1-201ENST00000562672 995 ntBASIC18.82■□□□□ 0.6
RTN4IP1Q8WWV3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4IP1Q8WWV3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 KRT18P24-201ENST00000344739 1156 ntBASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 YBX1P4-201ENST00000392794 808 ntBASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 KRT8P33-201ENST00000508125 1423 ntBASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 AC127496.7-201ENST00000625110 1798 ntBASIC18.81■□□□□ 0.6
RTN4IP1Q8WWV3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RTN4IP1Q8WWV3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4IP1Q8WWV3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4IP1Q8WWV3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.8■□□□□ 0.6
RTN4IP1Q8WWV3 THA1P-201ENST00000590384 1145 ntBASIC18.8■□□□□ 0.6
RTN4IP1Q8WWV3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4IP1Q8WWV3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.8■□□□□ 0.6
RTN4IP1Q8WWV3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4IP1Q8WWV3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4IP1Q8WWV3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4IP1Q8WWV3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RTN4IP1Q8WWV3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4IP1Q8WWV3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.8■□□□□ 0.6
RTN4IP1Q8WWV3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RTN4IP1Q8WWV3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4IP1Q8WWV3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.8■□□□□ 0.6
RTN4IP1Q8WWV3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTN4IP1Q8WWV3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms