Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CT55Q8WUE5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CT55Q8WUE5 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.1■□□□□ 0.97
CT55Q8WUE5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.1■□□□□ 0.97
CT55Q8WUE5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CT55Q8WUE5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CT55Q8WUE5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CT55Q8WUE5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CT55Q8WUE5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CT55Q8WUE5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.1■□□□□ 0.97
CT55Q8WUE5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
CT55Q8WUE5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CT55Q8WUE5 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.09■□□□□ 0.97
CT55Q8WUE5 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CT55Q8WUE5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.09■□□□□ 0.97
CT55Q8WUE5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.09■□□□□ 0.97
CT55Q8WUE5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
CT55Q8WUE5 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CT55Q8WUE5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CT55Q8WUE5 AC138932.3-201ENST00000567634 1902 ntBASIC21.09■□□□□ 0.97
CT55Q8WUE5 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CT55Q8WUE5 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CT55Q8WUE5 AC133637.1-201ENST00000624115 1537 ntBASIC21.09■□□□□ 0.97
CT55Q8WUE5 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
CT55Q8WUE5 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CT55Q8WUE5 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CT55Q8WUE5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.08■□□□□ 0.97
CT55Q8WUE5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.08■□□□□ 0.97
CT55Q8WUE5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CT55Q8WUE5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.08■□□□□ 0.97
CT55Q8WUE5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CT55Q8WUE5 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.08■□□□□ 0.97
CT55Q8WUE5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CT55Q8WUE5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CT55Q8WUE5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CT55Q8WUE5 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CT55Q8WUE5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CT55Q8WUE5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CT55Q8WUE5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CT55Q8WUE5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.07■□□□□ 0.96
CT55Q8WUE5 AC142381.3-201ENST00000568208 1670 ntBASIC21.07■□□□□ 0.96
CT55Q8WUE5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CT55Q8WUE5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.07■□□□□ 0.96
CT55Q8WUE5 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CT55Q8WUE5 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CT55Q8WUE5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.06■□□□□ 0.96
CT55Q8WUE5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.06■□□□□ 0.96
CT55Q8WUE5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CT55Q8WUE5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.06■□□□□ 0.96
CT55Q8WUE5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CT55Q8WUE5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CT55Q8WUE5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CT55Q8WUE5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.06■□□□□ 0.96
CT55Q8WUE5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.06■□□□□ 0.96
CT55Q8WUE5 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CT55Q8WUE5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CT55Q8WUE5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CT55Q8WUE5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.05■□□□□ 0.96
CT55Q8WUE5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CT55Q8WUE5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.05■□□□□ 0.96
CT55Q8WUE5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.05■□□□□ 0.96
CT55Q8WUE5 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CT55Q8WUE5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CT55Q8WUE5 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.05■□□□□ 0.96
CT55Q8WUE5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.05■□□□□ 0.96
CT55Q8WUE5 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.05■□□□□ 0.96
CT55Q8WUE5 IGHV3-19-201ENST00000521488 291 ntBASIC21.05■□□□□ 0.96
CT55Q8WUE5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CT55Q8WUE5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.05■□□□□ 0.96
CT55Q8WUE5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.05■□□□□ 0.96
CT55Q8WUE5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CT55Q8WUE5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.04■□□□□ 0.96
CT55Q8WUE5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CT55Q8WUE5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CT55Q8WUE5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CT55Q8WUE5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CT55Q8WUE5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CT55Q8WUE5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.04■□□□□ 0.96
CT55Q8WUE5 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
CT55Q8WUE5 AL499627.2-201ENST00000606283 725 ntBASIC21.04■□□□□ 0.96
CT55Q8WUE5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CT55Q8WUE5 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CT55Q8WUE5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CT55Q8WUE5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.04■□□□□ 0.96
CT55Q8WUE5 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
CT55Q8WUE5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.03■□□□□ 0.96
CT55Q8WUE5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.03■□□□□ 0.96
CT55Q8WUE5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.03■□□□□ 0.96
CT55Q8WUE5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.03■□□□□ 0.96
CT55Q8WUE5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
CT55Q8WUE5 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CT55Q8WUE5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CT55Q8WUE5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CT55Q8WUE5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CT55Q8WUE5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CT55Q8WUE5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CT55Q8WUE5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CT55Q8WUE5 FP325331.1-202ENST00000623531 1380 ntBASIC21.02■□□□□ 0.96
CT55Q8WUE5 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CT55Q8WUE5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms