Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TMC1Q8TDI8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC31.32■■■□□ 2.6
TMC1Q8TDI8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC31.32■■■□□ 2.6
TMC1Q8TDI8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC31.32■■■□□ 2.6
TMC1Q8TDI8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
TMC1Q8TDI8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
TMC1Q8TDI8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC31.32■■■□□ 2.6
TMC1Q8TDI8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TMC1Q8TDI8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
TMC1Q8TDI8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC31.31■■■□□ 2.6
TMC1Q8TDI8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
TMC1Q8TDI8 AL136967.2-201ENST00000623968 743 ntBASIC31.31■■■□□ 2.6
TMC1Q8TDI8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
TMC1Q8TDI8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
TMC1Q8TDI8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
TMC1Q8TDI8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TMC1Q8TDI8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC31.3■■■□□ 2.6
TMC1Q8TDI8 AC241377.3-202ENST00000626088 1088 ntBASIC31.3■■■□□ 2.6
TMC1Q8TDI8 AC241585.3-202ENST00000628937 1088 ntBASIC31.3■■■□□ 2.6
TMC1Q8TDI8 AC245100.8-202ENST00000629247 1058 ntBASIC31.3■■■□□ 2.6
TMC1Q8TDI8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
TMC1Q8TDI8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TMC1Q8TDI8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
TMC1Q8TDI8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TMC1Q8TDI8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TMC1Q8TDI8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC31.29■■■□□ 2.6
TMC1Q8TDI8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TMC1Q8TDI8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC31.28■■■□□ 2.6
TMC1Q8TDI8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC31.28■■■□□ 2.6
TMC1Q8TDI8 AP001330.3-201ENST00000520123 633 ntBASIC31.28■■■□□ 2.6
TMC1Q8TDI8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TMC1Q8TDI8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TMC1Q8TDI8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC31.28■■■□□ 2.6
TMC1Q8TDI8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TMC1Q8TDI8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TMC1Q8TDI8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC31.27■■■□□ 2.6
TMC1Q8TDI8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TMC1Q8TDI8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
TMC1Q8TDI8 AC009086.3-201ENST00000623486 1008 ntBASIC31.27■■■□□ 2.6
TMC1Q8TDI8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC31.27■■■□□ 2.6
TMC1Q8TDI8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
TMC1Q8TDI8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
TMC1Q8TDI8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC31.27■■■□□ 2.6
TMC1Q8TDI8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
TMC1Q8TDI8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
TMC1Q8TDI8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
TMC1Q8TDI8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
TMC1Q8TDI8 MIR939-201ENST00000401314 82 ntBASIC31.26■■■□□ 2.59
TMC1Q8TDI8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
TMC1Q8TDI8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
TMC1Q8TDI8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TMC1Q8TDI8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC31.25■■■□□ 2.59
TMC1Q8TDI8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC31.25■■■□□ 2.59
TMC1Q8TDI8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
TMC1Q8TDI8 MAG-206ENST00000597035 542 ntTSL 4 BASIC31.25■■■□□ 2.59
TMC1Q8TDI8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TMC1Q8TDI8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
TMC1Q8TDI8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TMC1Q8TDI8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC31.25■■■□□ 2.59
TMC1Q8TDI8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TMC1Q8TDI8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC31.24■■■□□ 2.59
TMC1Q8TDI8 AC011298.3-201ENST00000615796 283 ntBASIC31.24■■■□□ 2.59
TMC1Q8TDI8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
TMC1Q8TDI8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TMC1Q8TDI8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC31.24■■■□□ 2.59
TMC1Q8TDI8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC31.23■■■□□ 2.59
TMC1Q8TDI8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
TMC1Q8TDI8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
TMC1Q8TDI8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC31.23■■■□□ 2.59
TMC1Q8TDI8 HES6-206ENST00000409574 738 ntTSL 2 BASIC31.23■■■□□ 2.59
TMC1Q8TDI8 AL138724.1-201ENST00000606771 1088 ntBASIC31.23■■■□□ 2.59
TMC1Q8TDI8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC31.23■■■□□ 2.59
TMC1Q8TDI8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
TMC1Q8TDI8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC31.22■■■□□ 2.59
TMC1Q8TDI8 AC105265.2-201ENST00000467189 838 ntBASIC31.22■■■□□ 2.59
TMC1Q8TDI8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC31.22■■■□□ 2.59
TMC1Q8TDI8 MIR3181-201ENST00000578512 73 ntBASIC31.22■■■□□ 2.59
TMC1Q8TDI8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC31.22■■■□□ 2.59
TMC1Q8TDI8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC31.22■■■□□ 2.59
TMC1Q8TDI8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
TMC1Q8TDI8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TMC1Q8TDI8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TMC1Q8TDI8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC31.22■■■□□ 2.59
TMC1Q8TDI8 ABCB10P4-201ENST00000566803 2184 ntBASIC31.22■■■□□ 2.59
TMC1Q8TDI8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
TMC1Q8TDI8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TMC1Q8TDI8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC31.21■■■□□ 2.59
TMC1Q8TDI8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
TMC1Q8TDI8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC31.21■■■□□ 2.59
TMC1Q8TDI8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
TMC1Q8TDI8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
TMC1Q8TDI8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
TMC1Q8TDI8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC31.2■■■□□ 2.59
TMC1Q8TDI8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC31.2■■■□□ 2.59
TMC1Q8TDI8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC31.2■■■□□ 2.59
TMC1Q8TDI8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC31.2■■■□□ 2.58
TMC1Q8TDI8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.58
TMC1Q8TDI8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
TMC1Q8TDI8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
TMC1Q8TDI8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms