Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HIPK4Q8NE63 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HIPK4Q8NE63 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HIPK4Q8NE63 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK4Q8NE63 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK4Q8NE63 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK4Q8NE63 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
HIPK4Q8NE63 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.73■■□□□ 1.07
HIPK4Q8NE63 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK4Q8NE63 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK4Q8NE63 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
HIPK4Q8NE63 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
HIPK4Q8NE63 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
HIPK4Q8NE63 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
HIPK4Q8NE63 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
HIPK4Q8NE63 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.72■■□□□ 1.07
HIPK4Q8NE63 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.72■■□□□ 1.07
HIPK4Q8NE63 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HIPK4Q8NE63 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.72■■□□□ 1.07
HIPK4Q8NE63 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HIPK4Q8NE63 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HIPK4Q8NE63 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HIPK4Q8NE63 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HIPK4Q8NE63 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HIPK4Q8NE63 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIPK4Q8NE63 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIPK4Q8NE63 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIPK4Q8NE63 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIPK4Q8NE63 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.71■■□□□ 1.07
HIPK4Q8NE63 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIPK4Q8NE63 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIPK4Q8NE63 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIPK4Q8NE63 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIPK4Q8NE63 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HIPK4Q8NE63 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.71■■□□□ 1.07
HIPK4Q8NE63 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIPK4Q8NE63 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.71■■□□□ 1.07
HIPK4Q8NE63 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIPK4Q8NE63 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.71■■□□□ 1.07
HIPK4Q8NE63 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIPK4Q8NE63 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HIPK4Q8NE63 AC009831.1-201ENST00000580420 1582 ntBASIC21.7■■□□□ 1.06
HIPK4Q8NE63 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HIPK4Q8NE63 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HIPK4Q8NE63 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HIPK4Q8NE63 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.7■■□□□ 1.06
HIPK4Q8NE63 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.7■■□□□ 1.06
HIPK4Q8NE63 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HIPK4Q8NE63 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HIPK4Q8NE63 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.7■■□□□ 1.06
HIPK4Q8NE63 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
HIPK4Q8NE63 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
HIPK4Q8NE63 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
HIPK4Q8NE63 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HIPK4Q8NE63 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
HIPK4Q8NE63 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
HIPK4Q8NE63 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.69■■□□□ 1.06
HIPK4Q8NE63 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HIPK4Q8NE63 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
HIPK4Q8NE63 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
HIPK4Q8NE63 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
HIPK4Q8NE63 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HIPK4Q8NE63 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HIPK4Q8NE63 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
HIPK4Q8NE63 AC133552.2-201ENST00000619106 1032 ntBASIC21.68■■□□□ 1.06
HIPK4Q8NE63 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HIPK4Q8NE63 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HIPK4Q8NE63 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HIPK4Q8NE63 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HIPK4Q8NE63 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HIPK4Q8NE63 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.68■■□□□ 1.06
HIPK4Q8NE63 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HIPK4Q8NE63 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
HIPK4Q8NE63 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HIPK4Q8NE63 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HIPK4Q8NE63 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HIPK4Q8NE63 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HIPK4Q8NE63 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
HIPK4Q8NE63 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HIPK4Q8NE63 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.67■■□□□ 1.06
HIPK4Q8NE63 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
HIPK4Q8NE63 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HIPK4Q8NE63 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.67■■□□□ 1.06
HIPK4Q8NE63 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
HIPK4Q8NE63 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HIPK4Q8NE63 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HIPK4Q8NE63 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
HIPK4Q8NE63 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HIPK4Q8NE63 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.66■■□□□ 1.06
HIPK4Q8NE63 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.66■■□□□ 1.06
HIPK4Q8NE63 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HIPK4Q8NE63 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.66■■□□□ 1.06
HIPK4Q8NE63 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
HIPK4Q8NE63 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HIPK4Q8NE63 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HIPK4Q8NE63 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HIPK4Q8NE63 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
HIPK4Q8NE63 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.65■■□□□ 1.06
HIPK4Q8NE63 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.65■■□□□ 1.06
HIPK4Q8NE63 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms