Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 pRNA.11-201ENST00000618423 90 ntBASIC26.62■■□□□ 1.85
SLC44A5Q8NCS7 pRNA.13-201ENST00000619112 90 ntBASIC26.62■■□□□ 1.85
SLC44A5Q8NCS7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.62■■□□□ 1.85
SLC44A5Q8NCS7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SLC44A5Q8NCS7 ABCB10P4-201ENST00000566803 2184 ntBASIC26.61■■□□□ 1.85
SLC44A5Q8NCS7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.61■■□□□ 1.85
SLC44A5Q8NCS7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
SLC44A5Q8NCS7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SLC44A5Q8NCS7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SLC44A5Q8NCS7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.61■■□□□ 1.85
SLC44A5Q8NCS7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
SLC44A5Q8NCS7 AC141586.4-201ENST00000624558 1573 ntBASIC26.61■■□□□ 1.85
SLC44A5Q8NCS7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SLC44A5Q8NCS7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SLC44A5Q8NCS7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
SLC44A5Q8NCS7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.6■■□□□ 1.85
SLC44A5Q8NCS7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.6■■□□□ 1.85
SLC44A5Q8NCS7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.6■■□□□ 1.85
SLC44A5Q8NCS7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.6■■□□□ 1.85
SLC44A5Q8NCS7 AC136469.2-201ENST00000623944 1028 ntBASIC26.6■■□□□ 1.85
SLC44A5Q8NCS7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC26.6■■□□□ 1.85
SLC44A5Q8NCS7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SLC44A5Q8NCS7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SLC44A5Q8NCS7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SLC44A5Q8NCS7 AC105265.2-201ENST00000467189 838 ntBASIC26.59■■□□□ 1.85
SLC44A5Q8NCS7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SLC44A5Q8NCS7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.59■■□□□ 1.85
SLC44A5Q8NCS7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SLC44A5Q8NCS7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.59■■□□□ 1.85
SLC44A5Q8NCS7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SLC44A5Q8NCS7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.59■■□□□ 1.85
SLC44A5Q8NCS7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
SLC44A5Q8NCS7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
SLC44A5Q8NCS7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SLC44A5Q8NCS7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SLC44A5Q8NCS7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
SLC44A5Q8NCS7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.58■■□□□ 1.85
SLC44A5Q8NCS7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SLC44A5Q8NCS7 AC008764.7-201ENST00000593779 1081 ntBASIC26.58■■□□□ 1.85
SLC44A5Q8NCS7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.58■■□□□ 1.85
SLC44A5Q8NCS7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.58■■□□□ 1.85
SLC44A5Q8NCS7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.58■■□□□ 1.85
SLC44A5Q8NCS7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
SLC44A5Q8NCS7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.58■■□□□ 1.84
SLC44A5Q8NCS7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.57■■□□□ 1.84
SLC44A5Q8NCS7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.57■■□□□ 1.84
SLC44A5Q8NCS7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26.57■■□□□ 1.84
SLC44A5Q8NCS7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
SLC44A5Q8NCS7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.57■■□□□ 1.84
SLC44A5Q8NCS7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SLC44A5Q8NCS7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SLC44A5Q8NCS7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SLC44A5Q8NCS7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
SLC44A5Q8NCS7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SLC44A5Q8NCS7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SLC44A5Q8NCS7 AC091305.1-201ENST00000479476 895 ntBASIC26.56■■□□□ 1.84
SLC44A5Q8NCS7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
SLC44A5Q8NCS7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.56■■□□□ 1.84
SLC44A5Q8NCS7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
SLC44A5Q8NCS7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SLC44A5Q8NCS7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SLC44A5Q8NCS7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.56■■□□□ 1.84
SLC44A5Q8NCS7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SLC44A5Q8NCS7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
SLC44A5Q8NCS7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SLC44A5Q8NCS7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SLC44A5Q8NCS7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
SLC44A5Q8NCS7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SLC44A5Q8NCS7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SLC44A5Q8NCS7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
SLC44A5Q8NCS7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SLC44A5Q8NCS7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.54■■□□□ 1.84
SLC44A5Q8NCS7 CA15P2-201ENST00000611168 834 ntBASIC26.54■■□□□ 1.84
SLC44A5Q8NCS7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SLC44A5Q8NCS7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SLC44A5Q8NCS7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SLC44A5Q8NCS7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
SLC44A5Q8NCS7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SLC44A5Q8NCS7 AC099791.1-201ENST00000416440 715 ntBASIC26.53■■□□□ 1.84
SLC44A5Q8NCS7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SLC44A5Q8NCS7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
SLC44A5Q8NCS7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SLC44A5Q8NCS7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.52■■□□□ 1.84
SLC44A5Q8NCS7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.52■■□□□ 1.84
SLC44A5Q8NCS7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SLC44A5Q8NCS7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SLC44A5Q8NCS7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SLC44A5Q8NCS7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.52■■□□□ 1.84
SLC44A5Q8NCS7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC26.52■■□□□ 1.84
SLC44A5Q8NCS7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
SLC44A5Q8NCS7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SLC44A5Q8NCS7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
SLC44A5Q8NCS7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SLC44A5Q8NCS7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SLC44A5Q8NCS7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SLC44A5Q8NCS7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SLC44A5Q8NCS7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.51■■□□□ 1.83
SLC44A5Q8NCS7 AC027682.1-201ENST00000562846 899 ntBASIC26.51■■□□□ 1.83
SLC44A5Q8NCS7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SLC44A5Q8NCS7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms