Protein–RNA interactions for Protein: Q8N9V2

TRIML1, Probable E3 ubiquitin-protein ligase TRIML1, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML1Q8N9V2 MIR4508-201ENST00000584178 70 ntBASIC25.07■■□□□ 1.6
TRIML1Q8N9V2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.07■■□□□ 1.6
TRIML1Q8N9V2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TRIML1Q8N9V2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TRIML1Q8N9V2 ESRRAP2-201ENST00000418437 1549 ntBASIC25.07■■□□□ 1.6
TRIML1Q8N9V2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TRIML1Q8N9V2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.06■■□□□ 1.6
TRIML1Q8N9V2 ECEL1P1-201ENST00000373592 1742 ntBASIC25.06■■□□□ 1.6
TRIML1Q8N9V2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
TRIML1Q8N9V2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
TRIML1Q8N9V2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
TRIML1Q8N9V2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
TRIML1Q8N9V2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRIML1Q8N9V2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
TRIML1Q8N9V2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRIML1Q8N9V2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.05■■□□□ 1.6
TRIML1Q8N9V2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
TRIML1Q8N9V2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.05■■□□□ 1.6
TRIML1Q8N9V2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.05■■□□□ 1.6
TRIML1Q8N9V2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRIML1Q8N9V2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.05■■□□□ 1.6
TRIML1Q8N9V2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.05■■□□□ 1.6
TRIML1Q8N9V2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
TRIML1Q8N9V2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
TRIML1Q8N9V2 EP400NL-214ENST00000641289 2402 ntBASIC25.04■■□□□ 1.6
TRIML1Q8N9V2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.04■■□□□ 1.6
TRIML1Q8N9V2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.04■■□□□ 1.6
TRIML1Q8N9V2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
TRIML1Q8N9V2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.04■■□□□ 1.6
TRIML1Q8N9V2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.04■■□□□ 1.6
TRIML1Q8N9V2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.04■■□□□ 1.6
TRIML1Q8N9V2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRIML1Q8N9V2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRIML1Q8N9V2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
TRIML1Q8N9V2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
TRIML1Q8N9V2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIML1Q8N9V2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC25.03■■□□□ 1.6
TRIML1Q8N9V2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TRIML1Q8N9V2 LINC00526-201ENST00000581067 1875 ntBASIC25.03■■□□□ 1.6
TRIML1Q8N9V2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIML1Q8N9V2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TRIML1Q8N9V2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.03■■□□□ 1.6
TRIML1Q8N9V2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.03■■□□□ 1.6
TRIML1Q8N9V2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIML1Q8N9V2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIML1Q8N9V2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIML1Q8N9V2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIML1Q8N9V2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TRIML1Q8N9V2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
TRIML1Q8N9V2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.02■■□□□ 1.6
TRIML1Q8N9V2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.02■■□□□ 1.6
TRIML1Q8N9V2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.02■■□□□ 1.6
TRIML1Q8N9V2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TRIML1Q8N9V2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TRIML1Q8N9V2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
TRIML1Q8N9V2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.01■■□□□ 1.59
TRIML1Q8N9V2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.01■■□□□ 1.59
TRIML1Q8N9V2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TRIML1Q8N9V2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.01■■□□□ 1.59
TRIML1Q8N9V2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TRIML1Q8N9V2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TRIML1Q8N9V2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
TRIML1Q8N9V2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TRIML1Q8N9V2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TRIML1Q8N9V2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.01■■□□□ 1.59
TRIML1Q8N9V2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
TRIML1Q8N9V2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
TRIML1Q8N9V2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TRIML1Q8N9V2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25■■□□□ 1.59
TRIML1Q8N9V2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TRIML1Q8N9V2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25■■□□□ 1.59
TRIML1Q8N9V2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC25■■□□□ 1.59
TRIML1Q8N9V2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC25■■□□□ 1.59
TRIML1Q8N9V2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
TRIML1Q8N9V2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
TRIML1Q8N9V2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.99■■□□□ 1.59
TRIML1Q8N9V2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TRIML1Q8N9V2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TRIML1Q8N9V2 AL353803.4-201ENST00000565882 1934 ntBASIC24.99■■□□□ 1.59
TRIML1Q8N9V2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TRIML1Q8N9V2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.98■■□□□ 1.59
TRIML1Q8N9V2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
TRIML1Q8N9V2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.98■■□□□ 1.59
TRIML1Q8N9V2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
TRIML1Q8N9V2 SNX5-217ENST00000606557 1087 ntBASIC24.98■■□□□ 1.59
TRIML1Q8N9V2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.98■■□□□ 1.59
TRIML1Q8N9V2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.98■■□□□ 1.59
TRIML1Q8N9V2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRIML1Q8N9V2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRIML1Q8N9V2 AC127496.7-201ENST00000625110 1798 ntBASIC24.98■■□□□ 1.59
TRIML1Q8N9V2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRIML1Q8N9V2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
TRIML1Q8N9V2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRIML1Q8N9V2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.97■■□□□ 1.59
TRIML1Q8N9V2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRIML1Q8N9V2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.97■■□□□ 1.59
TRIML1Q8N9V2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC24.97■■□□□ 1.59
TRIML1Q8N9V2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
TRIML1Q8N9V2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TRIML1Q8N9V2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms