Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.74■□□□□ 0.75
DTX3Q8N9I9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DTX3Q8N9I9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DTX3Q8N9I9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
DTX3Q8N9I9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DTX3Q8N9I9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DTX3Q8N9I9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
DTX3Q8N9I9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DTX3Q8N9I9 AC092068.2-201ENST00000590491 1708 ntBASIC19.73■□□□□ 0.75
DTX3Q8N9I9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DTX3Q8N9I9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DTX3Q8N9I9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
DTX3Q8N9I9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DTX3Q8N9I9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
DTX3Q8N9I9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DTX3Q8N9I9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DTX3Q8N9I9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
DTX3Q8N9I9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
DTX3Q8N9I9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DTX3Q8N9I9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.73■□□□□ 0.75
DTX3Q8N9I9 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.73■□□□□ 0.75
DTX3Q8N9I9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DTX3Q8N9I9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DTX3Q8N9I9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
DTX3Q8N9I9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.73■□□□□ 0.75
DTX3Q8N9I9 SMPD5-203ENST00000639008 1464 ntBASIC19.73■□□□□ 0.75
DTX3Q8N9I9 AC127496.7-201ENST00000625110 1798 ntBASIC19.72■□□□□ 0.75
DTX3Q8N9I9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 AL157400.5-201ENST00000507624 621 ntBASIC19.72■□□□□ 0.75
DTX3Q8N9I9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.72■□□□□ 0.75
DTX3Q8N9I9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DTX3Q8N9I9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.71■□□□□ 0.75
DTX3Q8N9I9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.71■□□□□ 0.75
DTX3Q8N9I9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DTX3Q8N9I9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
DTX3Q8N9I9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.71■□□□□ 0.75
DTX3Q8N9I9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.71■□□□□ 0.75
DTX3Q8N9I9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
DTX3Q8N9I9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
DTX3Q8N9I9 AC025884.2-201ENST00000553429 711 ntBASIC19.7■□□□□ 0.74
DTX3Q8N9I9 AC007029.1-201ENST00000604183 313 ntBASIC19.7■□□□□ 0.74
DTX3Q8N9I9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DTX3Q8N9I9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DTX3Q8N9I9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DTX3Q8N9I9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.69■□□□□ 0.74
DTX3Q8N9I9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DTX3Q8N9I9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.69■□□□□ 0.74
DTX3Q8N9I9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DTX3Q8N9I9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
DTX3Q8N9I9 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.69■□□□□ 0.74
DTX3Q8N9I9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
DTX3Q8N9I9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
DTX3Q8N9I9 MIR3960-201ENST00000583311 91 ntBASIC19.69■□□□□ 0.74
DTX3Q8N9I9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.69■□□□□ 0.74
DTX3Q8N9I9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DTX3Q8N9I9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DTX3Q8N9I9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.69■□□□□ 0.74
DTX3Q8N9I9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
DTX3Q8N9I9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DTX3Q8N9I9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DTX3Q8N9I9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DTX3Q8N9I9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DTX3Q8N9I9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DTX3Q8N9I9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DTX3Q8N9I9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DTX3Q8N9I9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
DTX3Q8N9I9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.68■□□□□ 0.74
DTX3Q8N9I9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DTX3Q8N9I9 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.68■□□□□ 0.74
DTX3Q8N9I9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
DTX3Q8N9I9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DTX3Q8N9I9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DTX3Q8N9I9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DTX3Q8N9I9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DTX3Q8N9I9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.68■□□□□ 0.74
DTX3Q8N9I9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DTX3Q8N9I9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
DTX3Q8N9I9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DTX3Q8N9I9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms