Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC15.07■□□□□ 0
LINC01561Q8N1V8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01561Q8N1V8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC15.07■□□□□ 0
LINC01561Q8N1V8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC15.07■□□□□ 0
LINC01561Q8N1V8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC15.07■□□□□ 0
LINC01561Q8N1V8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01561Q8N1V8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01561Q8N1V8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.07■□□□□ 0
LINC01561Q8N1V8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01561Q8N1V8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC15.07■□□□□ 0
LINC01561Q8N1V8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01561Q8N1V8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01561Q8N1V8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01561Q8N1V8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01561Q8N1V8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC15.06■□□□□ 0
LINC01561Q8N1V8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01561Q8N1V8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LINC01561Q8N1V8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC15.06■□□□□ 0
LINC01561Q8N1V8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01561Q8N1V8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC15.06■□□□□ 0
LINC01561Q8N1V8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01561Q8N1V8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01561Q8N1V8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC15.06■□□□□ 0
LINC01561Q8N1V8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01561Q8N1V8 ABHD17AP3-201ENST00000503096 1137 ntBASIC15.06■□□□□ 0
LINC01561Q8N1V8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC15.06■□□□□ 0
LINC01561Q8N1V8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01561Q8N1V8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01561Q8N1V8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01561Q8N1V8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01561Q8N1V8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01561Q8N1V8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01561Q8N1V8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LINC01561Q8N1V8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
LINC01561Q8N1V8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC15.05■□□□□ 0
LINC01561Q8N1V8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC15.05■□□□□ -0
LINC01561Q8N1V8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC15.05■□□□□ -0
LINC01561Q8N1V8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC15.05■□□□□ -0
LINC01561Q8N1V8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.05■□□□□ -0
LINC01561Q8N1V8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC15.05■□□□□ -0
LINC01561Q8N1V8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC01561Q8N1V8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC01561Q8N1V8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINC01561Q8N1V8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC15.05■□□□□ -0
LINC01561Q8N1V8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC15.05■□□□□ -0
LINC01561Q8N1V8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.05■□□□□ -0
LINC01561Q8N1V8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC01561Q8N1V8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINC01561Q8N1V8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINC01561Q8N1V8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINC01561Q8N1V8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
LINC01561Q8N1V8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.05■□□□□ -0
LINC01561Q8N1V8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LINC01561Q8N1V8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01561Q8N1V8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01561Q8N1V8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.04■□□□□ -0
LINC01561Q8N1V8 EP400NL-214ENST00000641289 2402 ntBASIC15.04■□□□□ -0
LINC01561Q8N1V8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC15.04■□□□□ -0
LINC01561Q8N1V8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01561Q8N1V8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01561Q8N1V8 AC079630.1-202ENST00000618127 1840 ntBASIC15.04■□□□□ -0
LINC01561Q8N1V8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC01561Q8N1V8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC15.04■□□□□ -0
LINC01561Q8N1V8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC01561Q8N1V8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC01561Q8N1V8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC15.04■□□□□ -0
LINC01561Q8N1V8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC15.04■□□□□ -0
LINC01561Q8N1V8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC01561Q8N1V8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01561Q8N1V8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01561Q8N1V8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01561Q8N1V8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LINC01561Q8N1V8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01561Q8N1V8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01561Q8N1V8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01561Q8N1V8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01561Q8N1V8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
LINC01561Q8N1V8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC15.03■□□□□ -0
LINC01561Q8N1V8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC01561Q8N1V8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01561Q8N1V8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC15.03■□□□□ -0
LINC01561Q8N1V8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01561Q8N1V8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01561Q8N1V8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC15.03■□□□□ -0
LINC01561Q8N1V8 AC129492.7-201ENST00000622992 756 ntBASIC15.03■□□□□ -0
LINC01561Q8N1V8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01561Q8N1V8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC01561Q8N1V8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC01561Q8N1V8 LINC00565-201ENST00000562710 2331 ntBASIC15.03■□□□□ -0
LINC01561Q8N1V8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC01561Q8N1V8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC15.03■□□□□ -0
LINC01561Q8N1V8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC01561Q8N1V8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
LINC01561Q8N1V8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.02■□□□□ -0
LINC01561Q8N1V8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC01561Q8N1V8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC01561Q8N1V8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.02■□□□□ -0
LINC01561Q8N1V8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC01561Q8N1V8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC01561Q8N1V8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms