Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM48Q8IWZ4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM48Q8IWZ4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM48Q8IWZ4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM48Q8IWZ4 AC106739.1-201ENST00000617035 715 ntBASIC21.99■■□□□ 1.11
TRIM48Q8IWZ4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
TRIM48Q8IWZ4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM48Q8IWZ4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM48Q8IWZ4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM48Q8IWZ4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.98■■□□□ 1.11
TRIM48Q8IWZ4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM48Q8IWZ4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.98■■□□□ 1.11
TRIM48Q8IWZ4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM48Q8IWZ4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
TRIM48Q8IWZ4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.98■■□□□ 1.11
TRIM48Q8IWZ4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM48Q8IWZ4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM48Q8IWZ4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM48Q8IWZ4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.98■■□□□ 1.11
TRIM48Q8IWZ4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM48Q8IWZ4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM48Q8IWZ4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.97■■□□□ 1.11
TRIM48Q8IWZ4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.97■■□□□ 1.11
TRIM48Q8IWZ4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM48Q8IWZ4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
TRIM48Q8IWZ4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.97■■□□□ 1.11
TRIM48Q8IWZ4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM48Q8IWZ4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM48Q8IWZ4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.96■■□□□ 1.11
TRIM48Q8IWZ4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM48Q8IWZ4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM48Q8IWZ4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM48Q8IWZ4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM48Q8IWZ4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.96■■□□□ 1.11
TRIM48Q8IWZ4 AC024257.2-201ENST00000549699 147 ntBASIC21.96■■□□□ 1.11
TRIM48Q8IWZ4 AC133561.4-201ENST00000566112 224 ntBASIC21.96■■□□□ 1.11
TRIM48Q8IWZ4 AC009086.3-201ENST00000623486 1008 ntBASIC21.96■■□□□ 1.11
TRIM48Q8IWZ4 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.96■■□□□ 1.11
TRIM48Q8IWZ4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM48Q8IWZ4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
TRIM48Q8IWZ4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.96■■□□□ 1.11
TRIM48Q8IWZ4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.95■■□□□ 1.1
TRIM48Q8IWZ4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM48Q8IWZ4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.95■■□□□ 1.1
TRIM48Q8IWZ4 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.95■■□□□ 1.1
TRIM48Q8IWZ4 AC005837.3-201ENST00000612163 286 ntBASIC21.95■■□□□ 1.1
TRIM48Q8IWZ4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
TRIM48Q8IWZ4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM48Q8IWZ4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
TRIM48Q8IWZ4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM48Q8IWZ4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM48Q8IWZ4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM48Q8IWZ4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM48Q8IWZ4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM48Q8IWZ4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.94■■□□□ 1.1
TRIM48Q8IWZ4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.94■■□□□ 1.1
TRIM48Q8IWZ4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM48Q8IWZ4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM48Q8IWZ4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
TRIM48Q8IWZ4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM48Q8IWZ4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.94■■□□□ 1.1
TRIM48Q8IWZ4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
TRIM48Q8IWZ4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM48Q8IWZ4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM48Q8IWZ4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM48Q8IWZ4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM48Q8IWZ4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM48Q8IWZ4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.93■■□□□ 1.1
TRIM48Q8IWZ4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM48Q8IWZ4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
TRIM48Q8IWZ4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.93■■□□□ 1.1
TRIM48Q8IWZ4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM48Q8IWZ4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM48Q8IWZ4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.92■■□□□ 1.1
TRIM48Q8IWZ4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM48Q8IWZ4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM48Q8IWZ4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM48Q8IWZ4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM48Q8IWZ4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.92■■□□□ 1.1
TRIM48Q8IWZ4 SERBP1P1-201ENST00000396021 1160 ntBASIC21.92■■□□□ 1.1
TRIM48Q8IWZ4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.92■■□□□ 1.1
TRIM48Q8IWZ4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.92■■□□□ 1.1
TRIM48Q8IWZ4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.92■■□□□ 1.1
TRIM48Q8IWZ4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM48Q8IWZ4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM48Q8IWZ4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM48Q8IWZ4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.91■■□□□ 1.1
TRIM48Q8IWZ4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
TRIM48Q8IWZ4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM48Q8IWZ4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM48Q8IWZ4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM48Q8IWZ4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM48Q8IWZ4 AC142381.2-201ENST00000566120 298 ntBASIC21.91■■□□□ 1.1
TRIM48Q8IWZ4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
TRIM48Q8IWZ4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM48Q8IWZ4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TRIM48Q8IWZ4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM48Q8IWZ4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM48Q8IWZ4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM48Q8IWZ4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms