Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SHC4Q6S5L8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
SHC4Q6S5L8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
SHC4Q6S5L8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SHC4Q6S5L8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.48■■□□□ 1.67
SHC4Q6S5L8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.48■■□□□ 1.67
SHC4Q6S5L8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SHC4Q6S5L8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SHC4Q6S5L8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.47■■□□□ 1.67
SHC4Q6S5L8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SHC4Q6S5L8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.47■■□□□ 1.67
SHC4Q6S5L8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.47■■□□□ 1.67
SHC4Q6S5L8 AC079834.2-201ENST00000609776 1949 ntBASIC25.47■■□□□ 1.67
SHC4Q6S5L8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.47■■□□□ 1.67
SHC4Q6S5L8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SHC4Q6S5L8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SHC4Q6S5L8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SHC4Q6S5L8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SHC4Q6S5L8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SHC4Q6S5L8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.46■■□□□ 1.67
SHC4Q6S5L8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.46■■□□□ 1.67
SHC4Q6S5L8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC25.46■■□□□ 1.67
SHC4Q6S5L8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
SHC4Q6S5L8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SHC4Q6S5L8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.45■■□□□ 1.67
SHC4Q6S5L8 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.45■■□□□ 1.67
SHC4Q6S5L8 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.45■■□□□ 1.67
SHC4Q6S5L8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
SHC4Q6S5L8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SHC4Q6S5L8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.45■■□□□ 1.66
SHC4Q6S5L8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.45■■□□□ 1.66
SHC4Q6S5L8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SHC4Q6S5L8 AL117328.2-201ENST00000624617 1940 ntBASIC25.45■■□□□ 1.66
SHC4Q6S5L8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.45■■□□□ 1.66
SHC4Q6S5L8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SHC4Q6S5L8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SHC4Q6S5L8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
SHC4Q6S5L8 AC021242.3-201ENST00000607598 1377 ntBASIC25.44■■□□□ 1.66
SHC4Q6S5L8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SHC4Q6S5L8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SHC4Q6S5L8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SHC4Q6S5L8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
SHC4Q6S5L8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.44■■□□□ 1.66
SHC4Q6S5L8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.44■■□□□ 1.66
SHC4Q6S5L8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SHC4Q6S5L8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SHC4Q6S5L8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.44■■□□□ 1.66
SHC4Q6S5L8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
SHC4Q6S5L8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.43■■□□□ 1.66
SHC4Q6S5L8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.43■■□□□ 1.66
SHC4Q6S5L8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SHC4Q6S5L8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
SHC4Q6S5L8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.43■■□□□ 1.66
SHC4Q6S5L8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SHC4Q6S5L8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SHC4Q6S5L8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.42■■□□□ 1.66
SHC4Q6S5L8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SHC4Q6S5L8 AL353803.4-201ENST00000565882 1934 ntBASIC25.42■■□□□ 1.66
SHC4Q6S5L8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
SHC4Q6S5L8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SHC4Q6S5L8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
SHC4Q6S5L8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SHC4Q6S5L8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.41■■□□□ 1.66
SHC4Q6S5L8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.41■■□□□ 1.66
SHC4Q6S5L8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.41■■□□□ 1.66
SHC4Q6S5L8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.41■■□□□ 1.66
SHC4Q6S5L8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.41■■□□□ 1.66
SHC4Q6S5L8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
SHC4Q6S5L8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHC4Q6S5L8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
SHC4Q6S5L8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHC4Q6S5L8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.4■■□□□ 1.66
SHC4Q6S5L8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHC4Q6S5L8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.4■■□□□ 1.66
SHC4Q6S5L8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.4■■□□□ 1.66
SHC4Q6S5L8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.4■■□□□ 1.66
SHC4Q6S5L8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHC4Q6S5L8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SHC4Q6S5L8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHC4Q6S5L8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHC4Q6S5L8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHC4Q6S5L8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHC4Q6S5L8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SHC4Q6S5L8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
SHC4Q6S5L8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SHC4Q6S5L8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
SHC4Q6S5L8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.39■■□□□ 1.66
SHC4Q6S5L8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SHC4Q6S5L8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SHC4Q6S5L8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.38■■□□□ 1.65
SHC4Q6S5L8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SHC4Q6S5L8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SHC4Q6S5L8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
SHC4Q6S5L8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SHC4Q6S5L8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SHC4Q6S5L8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.38■■□□□ 1.65
SHC4Q6S5L8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
SHC4Q6S5L8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC25.37■■□□□ 1.65
SHC4Q6S5L8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.37■■□□□ 1.65
SHC4Q6S5L8 EP400NL-214ENST00000641289 2402 ntBASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms