Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C11orf88Q6PI97 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.4■□□□□ 0.7
C11orf88Q6PI97 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.4■□□□□ 0.7
C11orf88Q6PI97 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C11orf88Q6PI97 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C11orf88Q6PI97 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C11orf88Q6PI97 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C11orf88Q6PI97 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.4■□□□□ 0.7
C11orf88Q6PI97 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
C11orf88Q6PI97 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.4■□□□□ 0.7
C11orf88Q6PI97 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
C11orf88Q6PI97 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C11orf88Q6PI97 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
C11orf88Q6PI97 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C11orf88Q6PI97 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
C11orf88Q6PI97 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
C11orf88Q6PI97 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C11orf88Q6PI97 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C11orf88Q6PI97 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
C11orf88Q6PI97 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
C11orf88Q6PI97 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
C11orf88Q6PI97 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
C11orf88Q6PI97 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
C11orf88Q6PI97 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C11orf88Q6PI97 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
C11orf88Q6PI97 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
C11orf88Q6PI97 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
C11orf88Q6PI97 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
C11orf88Q6PI97 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.39■□□□□ 0.69
C11orf88Q6PI97 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
C11orf88Q6PI97 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
C11orf88Q6PI97 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.38■□□□□ 0.69
C11orf88Q6PI97 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
C11orf88Q6PI97 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
C11orf88Q6PI97 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
C11orf88Q6PI97 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
C11orf88Q6PI97 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
C11orf88Q6PI97 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
C11orf88Q6PI97 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.38■□□□□ 0.69
C11orf88Q6PI97 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
C11orf88Q6PI97 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
C11orf88Q6PI97 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
C11orf88Q6PI97 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
C11orf88Q6PI97 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C11orf88Q6PI97 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C11orf88Q6PI97 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C11orf88Q6PI97 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C11orf88Q6PI97 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.37■□□□□ 0.69
C11orf88Q6PI97 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.37■□□□□ 0.69
C11orf88Q6PI97 DUX4L18-201ENST00000553347 1267 ntBASIC19.37■□□□□ 0.69
C11orf88Q6PI97 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.37■□□□□ 0.69
C11orf88Q6PI97 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C11orf88Q6PI97 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.37■□□□□ 0.69
C11orf88Q6PI97 AC018755.3-202ENST00000596210 929 ntBASIC19.37■□□□□ 0.69
C11orf88Q6PI97 MIR6765-201ENST00000614092 87 ntBASIC19.37■□□□□ 0.69
C11orf88Q6PI97 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
C11orf88Q6PI97 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
C11orf88Q6PI97 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.37■□□□□ 0.69
C11orf88Q6PI97 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
C11orf88Q6PI97 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C11orf88Q6PI97 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.36■□□□□ 0.69
C11orf88Q6PI97 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.36■□□□□ 0.69
C11orf88Q6PI97 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C11orf88Q6PI97 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
C11orf88Q6PI97 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
C11orf88Q6PI97 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C11orf88Q6PI97 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C11orf88Q6PI97 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C11orf88Q6PI97 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
C11orf88Q6PI97 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.36■□□□□ 0.69
C11orf88Q6PI97 RARRES2P1-201ENST00000474487 481 ntBASIC19.36■□□□□ 0.69
C11orf88Q6PI97 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.36■□□□□ 0.69
C11orf88Q6PI97 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
C11orf88Q6PI97 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
C11orf88Q6PI97 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
C11orf88Q6PI97 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
C11orf88Q6PI97 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
C11orf88Q6PI97 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.35■□□□□ 0.69
C11orf88Q6PI97 LINC00526-201ENST00000581067 1875 ntBASIC19.35■□□□□ 0.69
C11orf88Q6PI97 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C11orf88Q6PI97 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
C11orf88Q6PI97 DUX4L9-201ENST00000449051 1259 ntBASIC19.35■□□□□ 0.69
C11orf88Q6PI97 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
C11orf88Q6PI97 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.35■□□□□ 0.69
C11orf88Q6PI97 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.35■□□□□ 0.69
C11orf88Q6PI97 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.35■□□□□ 0.69
C11orf88Q6PI97 BHLHE23-202ENST00000612929 1109 ntBASIC19.35■□□□□ 0.69
C11orf88Q6PI97 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
C11orf88Q6PI97 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
C11orf88Q6PI97 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C11orf88Q6PI97 AC127496.7-201ENST00000625110 1798 ntBASIC19.34■□□□□ 0.69
C11orf88Q6PI97 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C11orf88Q6PI97 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.34■□□□□ 0.69
C11orf88Q6PI97 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C11orf88Q6PI97 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.34■□□□□ 0.69
C11orf88Q6PI97 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.34■□□□□ 0.69
C11orf88Q6PI97 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
C11orf88Q6PI97 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
C11orf88Q6PI97 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
C11orf88Q6PI97 AC137767.1-201ENST00000602918 1920 ntBASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms