Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.55■□□□□ 0.88
RPUSD3Q6P087 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.55■□□□□ 0.88
RPUSD3Q6P087 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.55■□□□□ 0.88
RPUSD3Q6P087 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.55■□□□□ 0.88
RPUSD3Q6P087 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.55■□□□□ 0.88
RPUSD3Q6P087 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPUSD3Q6P087 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPUSD3Q6P087 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPUSD3Q6P087 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.55■□□□□ 0.88
RPUSD3Q6P087 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPUSD3Q6P087 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.55■□□□□ 0.88
RPUSD3Q6P087 AC141586.4-201ENST00000624558 1573 ntBASIC20.55■□□□□ 0.88
RPUSD3Q6P087 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPUSD3Q6P087 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
RPUSD3Q6P087 ALDH1A3-203ENST00000557963 1670 ntBASIC20.54■□□□□ 0.88
RPUSD3Q6P087 HLA-L-211ENST00000482052 1765 ntBASIC20.54■□□□□ 0.88
RPUSD3Q6P087 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RPUSD3Q6P087 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPUSD3Q6P087 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.54■□□□□ 0.88
RPUSD3Q6P087 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPUSD3Q6P087 pRNA.6-201ENST00000610482 90 ntBASIC20.54■□□□□ 0.88
RPUSD3Q6P087 pRNA.5-201ENST00000612139 90 ntBASIC20.54■□□□□ 0.88
RPUSD3Q6P087 pRNA.11-201ENST00000618423 90 ntBASIC20.54■□□□□ 0.88
RPUSD3Q6P087 pRNA.13-201ENST00000619112 90 ntBASIC20.54■□□□□ 0.88
RPUSD3Q6P087 AC093323.1-202ENST00000635031 2045 ntBASIC20.54■□□□□ 0.88
RPUSD3Q6P087 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RPUSD3Q6P087 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.54■□□□□ 0.88
RPUSD3Q6P087 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPUSD3Q6P087 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPUSD3Q6P087 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RPUSD3Q6P087 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.53■□□□□ 0.88
RPUSD3Q6P087 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPUSD3Q6P087 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RPUSD3Q6P087 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPUSD3Q6P087 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.53■□□□□ 0.88
RPUSD3Q6P087 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPUSD3Q6P087 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.53■□□□□ 0.88
RPUSD3Q6P087 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPUSD3Q6P087 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPUSD3Q6P087 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPUSD3Q6P087 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.52■□□□□ 0.88
RPUSD3Q6P087 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RPUSD3Q6P087 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.52■□□□□ 0.88
RPUSD3Q6P087 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.52■□□□□ 0.88
RPUSD3Q6P087 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RPUSD3Q6P087 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RPUSD3Q6P087 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPUSD3Q6P087 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPUSD3Q6P087 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPUSD3Q6P087 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.51■□□□□ 0.87
RPUSD3Q6P087 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPUSD3Q6P087 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RPUSD3Q6P087 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.51■□□□□ 0.87
RPUSD3Q6P087 AC126544.1-201ENST00000580842 1059 ntBASIC20.51■□□□□ 0.87
RPUSD3Q6P087 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPUSD3Q6P087 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
RPUSD3Q6P087 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPUSD3Q6P087 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.51■□□□□ 0.87
RPUSD3Q6P087 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
RPUSD3Q6P087 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.51■□□□□ 0.87
RPUSD3Q6P087 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.5■□□□□ 0.87
RPUSD3Q6P087 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPUSD3Q6P087 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RPUSD3Q6P087 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RPUSD3Q6P087 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.5■□□□□ 0.87
RPUSD3Q6P087 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.5■□□□□ 0.87
RPUSD3Q6P087 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.5■□□□□ 0.87
RPUSD3Q6P087 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPUSD3Q6P087 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.49■□□□□ 0.87
RPUSD3Q6P087 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPUSD3Q6P087 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPUSD3Q6P087 AC034268.1-201ENST00000441047 882 ntBASIC20.49■□□□□ 0.87
RPUSD3Q6P087 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPUSD3Q6P087 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.49■□□□□ 0.87
RPUSD3Q6P087 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.49■□□□□ 0.87
RPUSD3Q6P087 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.49■□□□□ 0.87
RPUSD3Q6P087 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPUSD3Q6P087 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPUSD3Q6P087 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPUSD3Q6P087 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPUSD3Q6P087 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.48■□□□□ 0.87
RPUSD3Q6P087 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPUSD3Q6P087 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPUSD3Q6P087 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.48■□□□□ 0.87
RPUSD3Q6P087 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.48■□□□□ 0.87
RPUSD3Q6P087 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPUSD3Q6P087 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPUSD3Q6P087 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPUSD3Q6P087 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.48■□□□□ 0.87
RPUSD3Q6P087 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPUSD3Q6P087 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RPUSD3Q6P087 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPUSD3Q6P087 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPUSD3Q6P087 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RPUSD3Q6P087 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RPUSD3Q6P087 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RPUSD3Q6P087 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.47■□□□□ 0.87
RPUSD3Q6P087 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.47■□□□□ 0.87
RPUSD3Q6P087 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RPUSD3Q6P087 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms