Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CDPF1Q6NVV7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.04■□□□□ 0.32
CDPF1Q6NVV7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.04■□□□□ 0.32
CDPF1Q6NVV7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
CDPF1Q6NVV7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDPF1Q6NVV7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDPF1Q6NVV7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.04■□□□□ 0.32
CDPF1Q6NVV7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDPF1Q6NVV7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDPF1Q6NVV7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.04■□□□□ 0.32
CDPF1Q6NVV7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDPF1Q6NVV7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDPF1Q6NVV7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.04■□□□□ 0.32
CDPF1Q6NVV7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDPF1Q6NVV7 AC026471.1-201ENST00000564629 3026 ntBASIC17.03■□□□□ 0.32
CDPF1Q6NVV7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDPF1Q6NVV7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.03■□□□□ 0.32
CDPF1Q6NVV7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CDPF1Q6NVV7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.03■□□□□ 0.32
CDPF1Q6NVV7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDPF1Q6NVV7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDPF1Q6NVV7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDPF1Q6NVV7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDPF1Q6NVV7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.02■□□□□ 0.32
CDPF1Q6NVV7 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.02■□□□□ 0.32
CDPF1Q6NVV7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDPF1Q6NVV7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDPF1Q6NVV7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.02■□□□□ 0.32
CDPF1Q6NVV7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDPF1Q6NVV7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.02■□□□□ 0.32
CDPF1Q6NVV7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.02■□□□□ 0.32
CDPF1Q6NVV7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDPF1Q6NVV7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CDPF1Q6NVV7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CDPF1Q6NVV7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDPF1Q6NVV7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC17■□□□□ 0.31
CDPF1Q6NVV7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDPF1Q6NVV7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CDPF1Q6NVV7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CDPF1Q6NVV7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CDPF1Q6NVV7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17■□□□□ 0.31
CDPF1Q6NVV7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDPF1Q6NVV7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDPF1Q6NVV7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17■□□□□ 0.31
CDPF1Q6NVV7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDPF1Q6NVV7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDPF1Q6NVV7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDPF1Q6NVV7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDPF1Q6NVV7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC16.99■□□□□ 0.31
CDPF1Q6NVV7 AC087289.5-201ENST00000586076 3175 ntBASIC16.99■□□□□ 0.31
CDPF1Q6NVV7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDPF1Q6NVV7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.99■□□□□ 0.31
CDPF1Q6NVV7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
CDPF1Q6NVV7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CDPF1Q6NVV7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.99■□□□□ 0.31
CDPF1Q6NVV7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.99■□□□□ 0.31
CDPF1Q6NVV7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDPF1Q6NVV7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.99■□□□□ 0.31
CDPF1Q6NVV7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDPF1Q6NVV7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CDPF1Q6NVV7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDPF1Q6NVV7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDPF1Q6NVV7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDPF1Q6NVV7 LINC00273-201ENST00000539813 1452 ntBASIC16.99■□□□□ 0.31
CDPF1Q6NVV7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDPF1Q6NVV7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDPF1Q6NVV7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDPF1Q6NVV7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.98■□□□□ 0.31
CDPF1Q6NVV7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDPF1Q6NVV7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDPF1Q6NVV7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDPF1Q6NVV7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDPF1Q6NVV7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.98■□□□□ 0.31
CDPF1Q6NVV7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDPF1Q6NVV7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC16.98■□□□□ 0.31
CDPF1Q6NVV7 AC005229.4-201ENST00000610085 2198 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms