Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
TTC39BQ5VTQ0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TTC39BQ5VTQ0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.34
TTC39BQ5VTQ0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TTC39BQ5VTQ0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
TTC39BQ5VTQ0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TTC39BQ5VTQ0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TTC39BQ5VTQ0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TTC39BQ5VTQ0 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.39■■□□□ 1.33
TTC39BQ5VTQ0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
TTC39BQ5VTQ0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TTC39BQ5VTQ0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.39■■□□□ 1.33
TTC39BQ5VTQ0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TTC39BQ5VTQ0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TTC39BQ5VTQ0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TTC39BQ5VTQ0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
TTC39BQ5VTQ0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.38■■□□□ 1.33
TTC39BQ5VTQ0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TTC39BQ5VTQ0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
TTC39BQ5VTQ0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TTC39BQ5VTQ0 AL136116.3-201ENST00000402907 1138 ntBASIC23.38■■□□□ 1.33
TTC39BQ5VTQ0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
TTC39BQ5VTQ0 MIR4466-201ENST00000606121 54 ntBASIC23.38■■□□□ 1.33
TTC39BQ5VTQ0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TTC39BQ5VTQ0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
TTC39BQ5VTQ0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TTC39BQ5VTQ0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.37■■□□□ 1.33
TTC39BQ5VTQ0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.37■■□□□ 1.33
TTC39BQ5VTQ0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
TTC39BQ5VTQ0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.37■■□□□ 1.33
TTC39BQ5VTQ0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
TTC39BQ5VTQ0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
TTC39BQ5VTQ0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TTC39BQ5VTQ0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.36■■□□□ 1.33
TTC39BQ5VTQ0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TTC39BQ5VTQ0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TTC39BQ5VTQ0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.36■■□□□ 1.33
TTC39BQ5VTQ0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
TTC39BQ5VTQ0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TTC39BQ5VTQ0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
TTC39BQ5VTQ0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
TTC39BQ5VTQ0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TTC39BQ5VTQ0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
TTC39BQ5VTQ0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.35■■□□□ 1.33
TTC39BQ5VTQ0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TTC39BQ5VTQ0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
TTC39BQ5VTQ0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.34■■□□□ 1.33
TTC39BQ5VTQ0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TTC39BQ5VTQ0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.34■■□□□ 1.33
TTC39BQ5VTQ0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TTC39BQ5VTQ0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TTC39BQ5VTQ0 SRD5A1P1-201ENST00000442297 786 ntBASIC23.34■■□□□ 1.33
TTC39BQ5VTQ0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TTC39BQ5VTQ0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TTC39BQ5VTQ0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
TTC39BQ5VTQ0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.33■■□□□ 1.33
TTC39BQ5VTQ0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TTC39BQ5VTQ0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TTC39BQ5VTQ0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TTC39BQ5VTQ0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TTC39BQ5VTQ0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TTC39BQ5VTQ0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TTC39BQ5VTQ0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.33■■□□□ 1.33
TTC39BQ5VTQ0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TTC39BQ5VTQ0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.33■■□□□ 1.32
TTC39BQ5VTQ0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
TTC39BQ5VTQ0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
TTC39BQ5VTQ0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TTC39BQ5VTQ0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
TTC39BQ5VTQ0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC39BQ5VTQ0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC39BQ5VTQ0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TTC39BQ5VTQ0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC39BQ5VTQ0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC39BQ5VTQ0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.32■■□□□ 1.32
TTC39BQ5VTQ0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TTC39BQ5VTQ0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC39BQ5VTQ0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TTC39BQ5VTQ0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
TTC39BQ5VTQ0 AC009102.2-201ENST00000606772 1639 ntBASIC23.32■■□□□ 1.32
TTC39BQ5VTQ0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TTC39BQ5VTQ0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.32■■□□□ 1.32
TTC39BQ5VTQ0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TTC39BQ5VTQ0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC39BQ5VTQ0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC39BQ5VTQ0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.31■■□□□ 1.32
TTC39BQ5VTQ0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.31■■□□□ 1.32
TTC39BQ5VTQ0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
TTC39BQ5VTQ0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TTC39BQ5VTQ0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TTC39BQ5VTQ0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.3■■□□□ 1.32
TTC39BQ5VTQ0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
TTC39BQ5VTQ0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TTC39BQ5VTQ0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.3■■□□□ 1.32
TTC39BQ5VTQ0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.3■■□□□ 1.32
TTC39BQ5VTQ0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.3■■□□□ 1.32
TTC39BQ5VTQ0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.3■■□□□ 1.32
TTC39BQ5VTQ0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TTC39BQ5VTQ0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
TTC39BQ5VTQ0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms