Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ATPAF1Q5TC12 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATPAF1Q5TC12 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATPAF1Q5TC12 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.38■□□□□ 0.69
ATPAF1Q5TC12 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATPAF1Q5TC12 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATPAF1Q5TC12 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATPAF1Q5TC12 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ATPAF1Q5TC12 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATPAF1Q5TC12 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATPAF1Q5TC12 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ATPAF1Q5TC12 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.38■□□□□ 0.69
ATPAF1Q5TC12 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ATPAF1Q5TC12 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATPAF1Q5TC12 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATPAF1Q5TC12 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATPAF1Q5TC12 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATPAF1Q5TC12 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATPAF1Q5TC12 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATPAF1Q5TC12 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATPAF1Q5TC12 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ATPAF1Q5TC12 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATPAF1Q5TC12 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATPAF1Q5TC12 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ATPAF1Q5TC12 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATPAF1Q5TC12 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ATPAF1Q5TC12 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATPAF1Q5TC12 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ATPAF1Q5TC12 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATPAF1Q5TC12 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.37■□□□□ 0.69
ATPAF1Q5TC12 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ATPAF1Q5TC12 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ATPAF1Q5TC12 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.37■□□□□ 0.69
ATPAF1Q5TC12 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATPAF1Q5TC12 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.37■□□□□ 0.69
ATPAF1Q5TC12 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATPAF1Q5TC12 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.36■□□□□ 0.69
ATPAF1Q5TC12 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATPAF1Q5TC12 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATPAF1Q5TC12 AF131216.4-201ENST00000638924 1588 ntBASIC19.36■□□□□ 0.69
ATPAF1Q5TC12 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATPAF1Q5TC12 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATPAF1Q5TC12 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.36■□□□□ 0.69
ATPAF1Q5TC12 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATPAF1Q5TC12 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
ATPAF1Q5TC12 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATPAF1Q5TC12 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ATPAF1Q5TC12 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATPAF1Q5TC12 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATPAF1Q5TC12 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATPAF1Q5TC12 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.36■□□□□ 0.69
ATPAF1Q5TC12 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATPAF1Q5TC12 C1orf229-201ENST00000623686 2258 ntBASIC19.36■□□□□ 0.69
ATPAF1Q5TC12 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATPAF1Q5TC12 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATPAF1Q5TC12 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATPAF1Q5TC12 LINC00526-201ENST00000581067 1875 ntBASIC19.35■□□□□ 0.69
ATPAF1Q5TC12 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.35■□□□□ 0.69
ATPAF1Q5TC12 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.35■□□□□ 0.69
ATPAF1Q5TC12 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
ATPAF1Q5TC12 AL451085.2-201ENST00000605085 799 ntBASIC19.35■□□□□ 0.69
ATPAF1Q5TC12 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.35■□□□□ 0.69
ATPAF1Q5TC12 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ATPAF1Q5TC12 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ATPAF1Q5TC12 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATPAF1Q5TC12 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATPAF1Q5TC12 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
ATPAF1Q5TC12 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATPAF1Q5TC12 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.34■□□□□ 0.69
ATPAF1Q5TC12 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.34■□□□□ 0.69
ATPAF1Q5TC12 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATPAF1Q5TC12 Z92544.1-202ENST00000571933 1220 ntBASIC19.34■□□□□ 0.69
ATPAF1Q5TC12 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATPAF1Q5TC12 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.34■□□□□ 0.69
ATPAF1Q5TC12 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATPAF1Q5TC12 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATPAF1Q5TC12 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.34■□□□□ 0.69
ATPAF1Q5TC12 ANOS2P-203ENST00000472227 1816 ntBASIC19.34■□□□□ 0.69
ATPAF1Q5TC12 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ATPAF1Q5TC12 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATPAF1Q5TC12 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ATPAF1Q5TC12 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.33■□□□□ 0.69
ATPAF1Q5TC12 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATPAF1Q5TC12 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.33■□□□□ 0.69
ATPAF1Q5TC12 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATPAF1Q5TC12 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATPAF1Q5TC12 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.33■□□□□ 0.68
ATPAF1Q5TC12 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATPAF1Q5TC12 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.33■□□□□ 0.68
ATPAF1Q5TC12 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.33■□□□□ 0.68
ATPAF1Q5TC12 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
ATPAF1Q5TC12 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATPAF1Q5TC12 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATPAF1Q5TC12 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATPAF1Q5TC12 AL161729.1-201ENST00000604104 1402 ntBASIC19.33■□□□□ 0.68
ATPAF1Q5TC12 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATPAF1Q5TC12 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATPAF1Q5TC12 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.32■□□□□ 0.68
ATPAF1Q5TC12 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATPAF1Q5TC12 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms