Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC37.49■■■■□ 3.59
SNAPC4Q5SXM2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC37.49■■■■□ 3.59
SNAPC4Q5SXM2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC37.49■■■■□ 3.59
SNAPC4Q5SXM2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
SNAPC4Q5SXM2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
SNAPC4Q5SXM2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC37.48■■■■□ 3.59
SNAPC4Q5SXM2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC37.48■■■■□ 3.59
SNAPC4Q5SXM2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC37.48■■■■□ 3.59
SNAPC4Q5SXM2 AC016769.1-201ENST00000409132 1010 ntBASIC37.48■■■■□ 3.59
SNAPC4Q5SXM2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC37.48■■■■□ 3.59
SNAPC4Q5SXM2 AC066615.1-201ENST00000640911 628 ntBASIC37.48■■■■□ 3.59
SNAPC4Q5SXM2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC37.48■■■■□ 3.59
SNAPC4Q5SXM2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC37.48■■■■□ 3.59
SNAPC4Q5SXM2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC37.47■■■■□ 3.59
SNAPC4Q5SXM2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC37.47■■■■□ 3.59
SNAPC4Q5SXM2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC37.47■■■■□ 3.59
SNAPC4Q5SXM2 AC141586.4-201ENST00000624558 1573 ntBASIC37.47■■■■□ 3.59
SNAPC4Q5SXM2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC37.46■■■■□ 3.59
SNAPC4Q5SXM2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
SNAPC4Q5SXM2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC37.46■■■■□ 3.59
SNAPC4Q5SXM2 DBI-210ENST00000542275 757 ntTSL 5 BASIC37.46■■■■□ 3.59
SNAPC4Q5SXM2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC37.46■■■■□ 3.59
SNAPC4Q5SXM2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC37.45■■■■□ 3.59
SNAPC4Q5SXM2 TMEM191A-211ENST00000637163 1067 ntBASIC37.45■■■■□ 3.59
SNAPC4Q5SXM2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC37.45■■■■□ 3.59
SNAPC4Q5SXM2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC37.45■■■■□ 3.59
SNAPC4Q5SXM2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC37.45■■■■□ 3.59
SNAPC4Q5SXM2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC37.45■■■■□ 3.59
SNAPC4Q5SXM2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC37.45■■■■□ 3.59
SNAPC4Q5SXM2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC37.45■■■■□ 3.59
SNAPC4Q5SXM2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC37.45■■■■□ 3.59
SNAPC4Q5SXM2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC37.45■■■■□ 3.59
SNAPC4Q5SXM2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC37.44■■■■□ 3.58
SNAPC4Q5SXM2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
SNAPC4Q5SXM2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC37.44■■■■□ 3.58
SNAPC4Q5SXM2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC37.44■■■■□ 3.58
SNAPC4Q5SXM2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC37.44■■■■□ 3.58
SNAPC4Q5SXM2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC37.44■■■■□ 3.58
SNAPC4Q5SXM2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC37.44■■■■□ 3.58
SNAPC4Q5SXM2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC37.43■■■■□ 3.58
SNAPC4Q5SXM2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC37.43■■■■□ 3.58
SNAPC4Q5SXM2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC37.43■■■■□ 3.58
SNAPC4Q5SXM2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC37.43■■■■□ 3.58
SNAPC4Q5SXM2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC37.43■■■■□ 3.58
SNAPC4Q5SXM2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC37.43■■■■□ 3.58
SNAPC4Q5SXM2 OR2I1P-207ENST00000453522 948 ntBASIC37.43■■■■□ 3.58
SNAPC4Q5SXM2 AL109923.1-201ENST00000618799 583 ntBASIC37.43■■■■□ 3.58
SNAPC4Q5SXM2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC37.43■■■■□ 3.58
SNAPC4Q5SXM2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC37.43■■■■□ 3.58
SNAPC4Q5SXM2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC37.43■■■■□ 3.58
SNAPC4Q5SXM2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC37.42■■■■□ 3.58
SNAPC4Q5SXM2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC37.42■■■■□ 3.58
SNAPC4Q5SXM2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC37.42■■■■□ 3.58
SNAPC4Q5SXM2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
SNAPC4Q5SXM2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC37.42■■■■□ 3.58
SNAPC4Q5SXM2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC37.42■■■■□ 3.58
SNAPC4Q5SXM2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC37.42■■■■□ 3.58
SNAPC4Q5SXM2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC37.41■■■■□ 3.58
SNAPC4Q5SXM2 AC133637.1-201ENST00000624115 1537 ntBASIC37.41■■■■□ 3.58
SNAPC4Q5SXM2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC37.41■■■■□ 3.58
SNAPC4Q5SXM2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
SNAPC4Q5SXM2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC37.41■■■■□ 3.58
SNAPC4Q5SXM2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC37.41■■■■□ 3.58
SNAPC4Q5SXM2 AC006970.2-201ENST00000450065 779 ntBASIC37.41■■■■□ 3.58
SNAPC4Q5SXM2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC37.41■■■■□ 3.58
SNAPC4Q5SXM2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC37.41■■■■□ 3.58
SNAPC4Q5SXM2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC37.4■■■■□ 3.58
SNAPC4Q5SXM2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC37.4■■■■□ 3.58
SNAPC4Q5SXM2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC37.4■■■■□ 3.58
SNAPC4Q5SXM2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC37.4■■■■□ 3.58
SNAPC4Q5SXM2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC37.4■■■■□ 3.58
SNAPC4Q5SXM2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC37.39■■■■□ 3.58
SNAPC4Q5SXM2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC37.39■■■■□ 3.58
SNAPC4Q5SXM2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC37.39■■■■□ 3.58
SNAPC4Q5SXM2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
SNAPC4Q5SXM2 AC091060.1-201ENST00000623524 1766 ntBASIC37.39■■■■□ 3.58
SNAPC4Q5SXM2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC37.39■■■■□ 3.58
SNAPC4Q5SXM2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC37.39■■■■□ 3.58
SNAPC4Q5SXM2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
SNAPC4Q5SXM2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC37.39■■■■□ 3.58
SNAPC4Q5SXM2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC37.39■■■■□ 3.58
SNAPC4Q5SXM2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC37.38■■■■□ 3.57
SNAPC4Q5SXM2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
SNAPC4Q5SXM2 TPRG1LP1-201ENST00000598702 760 ntBASIC37.38■■■■□ 3.57
SNAPC4Q5SXM2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC37.37■■■■□ 3.57
SNAPC4Q5SXM2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC37.37■■■■□ 3.57
SNAPC4Q5SXM2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC37.37■■■■□ 3.57
SNAPC4Q5SXM2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC37.37■■■■□ 3.57
SNAPC4Q5SXM2 MIR663A-201ENST00000385250 93 ntBASIC37.37■■■■□ 3.57
SNAPC4Q5SXM2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC37.37■■■■□ 3.57
SNAPC4Q5SXM2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC37.36■■■■□ 3.57
SNAPC4Q5SXM2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC37.36■■■■□ 3.57
SNAPC4Q5SXM2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC37.36■■■■□ 3.57
SNAPC4Q5SXM2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC37.36■■■■□ 3.57
SNAPC4Q5SXM2 NCF1B-203ENST00000435988 1254 ntBASIC37.36■■■■□ 3.57
SNAPC4Q5SXM2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC37.36■■■■□ 3.57
SNAPC4Q5SXM2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC37.36■■■■□ 3.57
SNAPC4Q5SXM2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC37.36■■■■□ 3.57
SNAPC4Q5SXM2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC37.35■■■■□ 3.57
SNAPC4Q5SXM2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC37.35■■■■□ 3.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms