Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.38■□□□□ 0.85
RNFT1Q5M7Z0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.38■□□□□ 0.85
RNFT1Q5M7Z0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.38■□□□□ 0.85
RNFT1Q5M7Z0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.38■□□□□ 0.85
RNFT1Q5M7Z0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RNFT1Q5M7Z0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNFT1Q5M7Z0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNFT1Q5M7Z0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNFT1Q5M7Z0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNFT1Q5M7Z0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNFT1Q5M7Z0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.37■□□□□ 0.85
RNFT1Q5M7Z0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.37■□□□□ 0.85
RNFT1Q5M7Z0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RNFT1Q5M7Z0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RNFT1Q5M7Z0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNFT1Q5M7Z0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNFT1Q5M7Z0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNFT1Q5M7Z0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNFT1Q5M7Z0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNFT1Q5M7Z0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RNFT1Q5M7Z0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RNFT1Q5M7Z0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RNFT1Q5M7Z0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNFT1Q5M7Z0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNFT1Q5M7Z0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNFT1Q5M7Z0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.36■□□□□ 0.85
RNFT1Q5M7Z0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNFT1Q5M7Z0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.36■□□□□ 0.85
RNFT1Q5M7Z0 IRS3P-201ENST00000223076 1006 ntBASIC20.36■□□□□ 0.85
RNFT1Q5M7Z0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNFT1Q5M7Z0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.36■□□□□ 0.85
RNFT1Q5M7Z0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNFT1Q5M7Z0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNFT1Q5M7Z0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNFT1Q5M7Z0 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.36■□□□□ 0.85
RNFT1Q5M7Z0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNFT1Q5M7Z0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.35■□□□□ 0.85
RNFT1Q5M7Z0 MIR5787-201ENST00000611784 55 ntBASIC20.35■□□□□ 0.85
RNFT1Q5M7Z0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNFT1Q5M7Z0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
RNFT1Q5M7Z0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNFT1Q5M7Z0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNFT1Q5M7Z0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.35■□□□□ 0.85
RNFT1Q5M7Z0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNFT1Q5M7Z0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNFT1Q5M7Z0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNFT1Q5M7Z0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
RNFT1Q5M7Z0 MIR6821-201ENST00000617625 74 ntBASIC20.34■□□□□ 0.85
RNFT1Q5M7Z0 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.34■□□□□ 0.85
RNFT1Q5M7Z0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNFT1Q5M7Z0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNFT1Q5M7Z0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNFT1Q5M7Z0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RNFT1Q5M7Z0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNFT1Q5M7Z0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.33■□□□□ 0.85
RNFT1Q5M7Z0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNFT1Q5M7Z0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNFT1Q5M7Z0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.33■□□□□ 0.85
RNFT1Q5M7Z0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.33■□□□□ 0.85
RNFT1Q5M7Z0 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.33■□□□□ 0.85
RNFT1Q5M7Z0 AC097381.1-201ENST00000429019 1296 ntBASIC20.33■□□□□ 0.85
RNFT1Q5M7Z0 SLC47A1P1-202ENST00000449666 945 ntBASIC20.33■□□□□ 0.85
RNFT1Q5M7Z0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.33■□□□□ 0.85
RNFT1Q5M7Z0 AC087623.3-201ENST00000607047 1098 ntBASIC20.33■□□□□ 0.85
RNFT1Q5M7Z0 AC092666.2-201ENST00000613287 246 ntBASIC20.33■□□□□ 0.85
RNFT1Q5M7Z0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNFT1Q5M7Z0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RNFT1Q5M7Z0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.33■□□□□ 0.84
RNFT1Q5M7Z0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNFT1Q5M7Z0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNFT1Q5M7Z0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.32■□□□□ 0.84
RNFT1Q5M7Z0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNFT1Q5M7Z0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNFT1Q5M7Z0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNFT1Q5M7Z0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNFT1Q5M7Z0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNFT1Q5M7Z0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RNFT1Q5M7Z0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RNFT1Q5M7Z0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.31■□□□□ 0.84
RNFT1Q5M7Z0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNFT1Q5M7Z0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNFT1Q5M7Z0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNFT1Q5M7Z0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNFT1Q5M7Z0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.3■□□□□ 0.84
RNFT1Q5M7Z0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNFT1Q5M7Z0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNFT1Q5M7Z0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.3■□□□□ 0.84
RNFT1Q5M7Z0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.3■□□□□ 0.84
RNFT1Q5M7Z0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.3■□□□□ 0.84
RNFT1Q5M7Z0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
RNFT1Q5M7Z0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNFT1Q5M7Z0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RNFT1Q5M7Z0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNFT1Q5M7Z0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RNFT1Q5M7Z0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNFT1Q5M7Z0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.29■□□□□ 0.84
RNFT1Q5M7Z0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
RNFT1Q5M7Z0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RNFT1Q5M7Z0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.29■□□□□ 0.84
RNFT1Q5M7Z0 AC126544.1-201ENST00000580842 1059 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms