Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.8■■□□□ 1.08
SGO1Q5FBB7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SGO1Q5FBB7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SGO1Q5FBB7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SGO1Q5FBB7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SGO1Q5FBB7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SGO1Q5FBB7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SGO1Q5FBB7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SGO1Q5FBB7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.79■■□□□ 1.08
SGO1Q5FBB7 DUSP8P3-201ENST00000399571 1760 ntBASIC21.79■■□□□ 1.08
SGO1Q5FBB7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SGO1Q5FBB7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SGO1Q5FBB7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SGO1Q5FBB7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SGO1Q5FBB7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SGO1Q5FBB7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SGO1Q5FBB7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.78■■□□□ 1.08
SGO1Q5FBB7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.78■■□□□ 1.08
SGO1Q5FBB7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
SGO1Q5FBB7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.78■■□□□ 1.08
SGO1Q5FBB7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SGO1Q5FBB7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.78■■□□□ 1.08
SGO1Q5FBB7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SGO1Q5FBB7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SGO1Q5FBB7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.77■■□□□ 1.08
SGO1Q5FBB7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SGO1Q5FBB7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.77■■□□□ 1.08
SGO1Q5FBB7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
SGO1Q5FBB7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SGO1Q5FBB7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SGO1Q5FBB7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.77■■□□□ 1.08
SGO1Q5FBB7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SGO1Q5FBB7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SGO1Q5FBB7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SGO1Q5FBB7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.77■■□□□ 1.07
SGO1Q5FBB7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SGO1Q5FBB7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SGO1Q5FBB7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SGO1Q5FBB7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SGO1Q5FBB7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SGO1Q5FBB7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SGO1Q5FBB7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SGO1Q5FBB7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SGO1Q5FBB7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SGO1Q5FBB7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SGO1Q5FBB7 SNX5-217ENST00000606557 1087 ntBASIC21.75■■□□□ 1.07
SGO1Q5FBB7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SGO1Q5FBB7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.75■■□□□ 1.07
SGO1Q5FBB7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
SGO1Q5FBB7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SGO1Q5FBB7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
SGO1Q5FBB7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
SGO1Q5FBB7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.74■■□□□ 1.07
SGO1Q5FBB7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SGO1Q5FBB7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SGO1Q5FBB7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.74■■□□□ 1.07
SGO1Q5FBB7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.74■■□□□ 1.07
SGO1Q5FBB7 AC137630.3-201ENST00000607245 391 ntBASIC21.74■■□□□ 1.07
SGO1Q5FBB7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.74■■□□□ 1.07
SGO1Q5FBB7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.74■■□□□ 1.07
SGO1Q5FBB7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SGO1Q5FBB7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.74■■□□□ 1.07
SGO1Q5FBB7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SGO1Q5FBB7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SGO1Q5FBB7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SGO1Q5FBB7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SGO1Q5FBB7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.73■■□□□ 1.07
SGO1Q5FBB7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.73■■□□□ 1.07
SGO1Q5FBB7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.73■■□□□ 1.07
SGO1Q5FBB7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.73■■□□□ 1.07
SGO1Q5FBB7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SGO1Q5FBB7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.73■■□□□ 1.07
SGO1Q5FBB7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SGO1Q5FBB7 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.73■■□□□ 1.07
SGO1Q5FBB7 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.73■■□□□ 1.07
SGO1Q5FBB7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SGO1Q5FBB7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SGO1Q5FBB7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
SGO1Q5FBB7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.72■■□□□ 1.07
SGO1Q5FBB7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.72■■□□□ 1.07
SGO1Q5FBB7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SGO1Q5FBB7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SGO1Q5FBB7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SGO1Q5FBB7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SGO1Q5FBB7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SGO1Q5FBB7 AC079630.1-202ENST00000618127 1840 ntBASIC21.71■■□□□ 1.07
SGO1Q5FBB7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SGO1Q5FBB7 C1orf229-201ENST00000623686 2258 ntBASIC21.71■■□□□ 1.07
SGO1Q5FBB7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SGO1Q5FBB7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SGO1Q5FBB7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SGO1Q5FBB7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SGO1Q5FBB7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SGO1Q5FBB7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SGO1Q5FBB7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.71■■□□□ 1.07
SGO1Q5FBB7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.71■■□□□ 1.07
SGO1Q5FBB7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
SGO1Q5FBB7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SGO1Q5FBB7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SGO1Q5FBB7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms