Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.5■■□□□ 1.83
SHROOM1Q2M3G4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SHROOM1Q2M3G4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
SHROOM1Q2M3G4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
SHROOM1Q2M3G4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SHROOM1Q2M3G4 BX842568.3-201ENST00000418104 571 ntBASIC26.5■■□□□ 1.83
SHROOM1Q2M3G4 AC097381.1-201ENST00000429019 1296 ntBASIC26.5■■□□□ 1.83
SHROOM1Q2M3G4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SHROOM1Q2M3G4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SHROOM1Q2M3G4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SHROOM1Q2M3G4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
SHROOM1Q2M3G4 SLC47A1P1-202ENST00000449666 945 ntBASIC26.49■■□□□ 1.83
SHROOM1Q2M3G4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SHROOM1Q2M3G4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHROOM1Q2M3G4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHROOM1Q2M3G4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SHROOM1Q2M3G4 IRS3P-201ENST00000223076 1006 ntBASIC26.48■■□□□ 1.83
SHROOM1Q2M3G4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC26.48■■□□□ 1.83
SHROOM1Q2M3G4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.48■■□□□ 1.83
SHROOM1Q2M3G4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
SHROOM1Q2M3G4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHROOM1Q2M3G4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
SHROOM1Q2M3G4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHROOM1Q2M3G4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
SHROOM1Q2M3G4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SHROOM1Q2M3G4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC26.47■■□□□ 1.83
SHROOM1Q2M3G4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC26.47■■□□□ 1.83
SHROOM1Q2M3G4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SHROOM1Q2M3G4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
SHROOM1Q2M3G4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC26.47■■□□□ 1.83
SHROOM1Q2M3G4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC26.47■■□□□ 1.83
SHROOM1Q2M3G4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SHROOM1Q2M3G4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SHROOM1Q2M3G4 AC141586.4-201ENST00000624558 1573 ntBASIC26.46■■□□□ 1.83
SHROOM1Q2M3G4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SHROOM1Q2M3G4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SHROOM1Q2M3G4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
SHROOM1Q2M3G4 GRAMD4P2-201ENST00000423297 1097 ntBASIC26.46■■□□□ 1.83
SHROOM1Q2M3G4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.46■■□□□ 1.83
SHROOM1Q2M3G4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC26.46■■□□□ 1.83
SHROOM1Q2M3G4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SHROOM1Q2M3G4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
SHROOM1Q2M3G4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SHROOM1Q2M3G4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
SHROOM1Q2M3G4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.45■■□□□ 1.83
SHROOM1Q2M3G4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
SHROOM1Q2M3G4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.45■■□□□ 1.83
SHROOM1Q2M3G4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
SHROOM1Q2M3G4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.45■■□□□ 1.82
SHROOM1Q2M3G4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
SHROOM1Q2M3G4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
SHROOM1Q2M3G4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SHROOM1Q2M3G4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC26.44■■□□□ 1.82
SHROOM1Q2M3G4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.44■■□□□ 1.82
SHROOM1Q2M3G4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SHROOM1Q2M3G4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
SHROOM1Q2M3G4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SHROOM1Q2M3G4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.43■■□□□ 1.82
SHROOM1Q2M3G4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
SHROOM1Q2M3G4 AL162430.1-201ENST00000480705 870 ntBASIC26.43■■□□□ 1.82
SHROOM1Q2M3G4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SHROOM1Q2M3G4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SHROOM1Q2M3G4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SHROOM1Q2M3G4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
SHROOM1Q2M3G4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SHROOM1Q2M3G4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SHROOM1Q2M3G4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SHROOM1Q2M3G4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SHROOM1Q2M3G4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
SHROOM1Q2M3G4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SHROOM1Q2M3G4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC26.42■■□□□ 1.82
SHROOM1Q2M3G4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SHROOM1Q2M3G4 AC010525.1-201ENST00000585559 441 ntBASIC26.42■■□□□ 1.82
SHROOM1Q2M3G4 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.42■■□□□ 1.82
SHROOM1Q2M3G4 MPST-208ENST00000628507 698 ntTSL 5 BASIC26.42■■□□□ 1.82
SHROOM1Q2M3G4 AL031602.1-201ENST00000633169 911 ntBASIC26.42■■□□□ 1.82
SHROOM1Q2M3G4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC26.42■■□□□ 1.82
SHROOM1Q2M3G4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.42■■□□□ 1.82
SHROOM1Q2M3G4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SHROOM1Q2M3G4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC26.42■■□□□ 1.82
SHROOM1Q2M3G4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SHROOM1Q2M3G4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SHROOM1Q2M3G4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.41■■□□□ 1.82
SHROOM1Q2M3G4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
SHROOM1Q2M3G4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
SHROOM1Q2M3G4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.41■■□□□ 1.82
SHROOM1Q2M3G4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
SHROOM1Q2M3G4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
SHROOM1Q2M3G4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SHROOM1Q2M3G4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SHROOM1Q2M3G4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SHROOM1Q2M3G4 AC104564.3-201ENST00000582367 638 ntBASIC26.4■■□□□ 1.82
SHROOM1Q2M3G4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SHROOM1Q2M3G4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SHROOM1Q2M3G4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SHROOM1Q2M3G4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SHROOM1Q2M3G4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
SHROOM1Q2M3G4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SHROOM1Q2M3G4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.39■■□□□ 1.82
SHROOM1Q2M3G4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC26.39■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms