Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 ELA1YNL230C 1140 nt3.76□□□□□ -1.81
HRD1Q08109 GAS4YOL132W 1416 nt3.76□□□□□ -1.81
HRD1Q08109 MET12YPL023C 1974 nt3.76□□□□□ -1.81
HRD1Q08109 PEP5YMR231W 3090 nt3.76□□□□□ -1.81
HRD1Q08109 GRS2YPR081C 1857 nt3.75□□□□□ -1.81
HRD1Q08109 ALG6YOR002W 1635 nt3.75□□□□□ -1.81
HRD1Q08109 PER1YCR044C 1074 nt3.75□□□□□ -1.81
HRD1Q08109 LSO1YJR005C-A 282 nt3.75□□□□□ -1.81
HRD1Q08109 YLR374CYLR374C 390 nt3.75□□□□□ -1.81
HRD1Q08109 YMR130WYMR130W 909 nt3.75□□□□□ -1.81
HRD1Q08109 RCL1YOL010W 1104 nt3.75□□□□□ -1.81
HRD1Q08109 VID28YIL017C 2766 nt3.75□□□□□ -1.81
HRD1Q08109 YPK9YOR291W 4419 nt3.75□□□□□ -1.81
HRD1Q08109 RSC3YDR303C 2658 nt3.75□□□□□ -1.81
HRD1Q08109 MET4YNL103W 2019 nt3.75□□□□□ -1.81
HRD1Q08109 CYM1YDR430C 2970 nt3.75□□□□□ -1.81
HRD1Q08109 TRK1YJL129C 3708 nt3.74□□□□□ -1.81
HRD1Q08109 LDB17YDL146W 1476 nt3.74□□□□□ -1.81
HRD1Q08109 ZPR1YGR211W 1461 nt3.74□□□□□ -1.81
HRD1Q08109 RTC1YOL138C 4026 nt3.74□□□□□ -1.81
HRD1Q08109 NUP42YDR192C 1293 nt3.74□□□□□ -1.81
HRD1Q08109 PUT2YHR037W 1728 nt3.74□□□□□ -1.81
HRD1Q08109 GVP36YIL041W 981 nt3.74□□□□□ -1.81
HRD1Q08109 AAD10YJR155W 867 nt3.74□□□□□ -1.81
HRD1Q08109 LDB18YLL049W 540 nt3.74□□□□□ -1.81
HRD1Q08109 SAP30YMR263W 606 nt3.74□□□□□ -1.81
HRD1Q08109 YBR141W-AYBR141W-A 96 nt3.74□□□□□ -1.81
HRD1Q08109 RDH54YBR073W 2877 nt3.74□□□□□ -1.81
HRD1Q08109 SPT23YKL020C 3249 nt3.74□□□□□ -1.81
HRD1Q08109 TEL1YBL088C 8364 nt3.74□□□□□ -1.81
HRD1Q08109 VHS3YOR054C 2025 nt3.73□□□□□ -1.81
HRD1Q08109 PAH1YMR165C 2589 nt3.73□□□□□ -1.81
HRD1Q08109 RPS13YDR064W 456 nt3.73□□□□□ -1.81
HRD1Q08109 YIL021C-AYIL021C-A 270 nt3.73□□□□□ -1.81
HRD1Q08109 YJL218WYJL218W 591 nt3.73□□□□□ -1.81
HRD1Q08109 YNL165WYNL165W 1221 nt3.73□□□□□ -1.81
HRD1Q08109 DPB2YPR175W 2070 nt3.73□□□□□ -1.81
HRD1Q08109 MAG2YLR427W 2013 nt3.72□□□□□ -1.81
HRD1Q08109 COX4YGL187C 468 nt3.72□□□□□ -1.81
HRD1Q08109 BIO2YGR286C 1128 nt3.72□□□□□ -1.81
HRD1Q08109 YKR104WYKR104W 921 nt3.72□□□□□ -1.81
HRD1Q08109 YGP1YNL160W 1065 nt3.72□□□□□ -1.81
HRD1Q08109 URE2YNL229C 1065 nt3.72□□□□□ -1.81
HRD1Q08109 YIF1YNL263C 945 nt3.72□□□□□ -1.81
HRD1Q08109 MRM1YOR201C 1239 nt3.72□□□□□ -1.81
HRD1Q08109 ARG4YHR018C 1392 nt3.72□□□□□ -1.81
HRD1Q08109 PMC1YGL006W 3522 nt3.72□□□□□ -1.81
HRD1Q08109 OPT2YPR194C 2634 nt3.72□□□□□ -1.81
HRD1Q08109 OSH2YDL019C 3852 nt3.71□□□□□ -1.82
HRD1Q08109 RPP1AYDL081C 321 nt3.71□□□□□ -1.82
HRD1Q08109 tS(AGA)D3tS(AGA)D3 83 nt3.71□□□□□ -1.82
HRD1Q08109 MHO1YJR008W 1017 nt3.71□□□□□ -1.82
HRD1Q08109 YJR012CYJR012C 624 nt3.71□□□□□ -1.82
HRD1Q08109 NTR2YKR022C 969 nt3.71□□□□□ -1.82
HRD1Q08109 SRP40YKR092C 1221 nt3.71□□□□□ -1.82
HRD1Q08109 POP3YNL282W 588 nt3.71□□□□□ -1.82
HRD1Q08109 FEX1YOR390W 1128 nt3.71□□□□□ -1.82
HRD1Q08109 FEX2YPL279C 1128 nt3.71□□□□□ -1.82
HRD1Q08109 ATG14YBR128C 1035 nt3.71□□□□□ -1.82
HRD1Q08109 UMP1YBR173C 447 nt3.71□□□□□ -1.82
HRD1Q08109 PRD1YCL057W 2139 nt3.71□□□□□ -1.82
HRD1Q08109 PRM1YNL279W 1986 nt3.71□□□□□ -1.82
HRD1Q08109 ECM22YLR228C 2445 nt3.7□□□□□ -1.82
HRD1Q08109 RAM1YDL090C 1296 nt3.7□□□□□ -1.82
HRD1Q08109 ARF2YDL137W 546 nt3.7□□□□□ -1.82
HRD1Q08109 SPR28YDR218C 1272 nt3.7□□□□□ -1.82
HRD1Q08109 RTA1YGR213C 954 nt3.7□□□□□ -1.82
HRD1Q08109 CDC42YLR229C 576 nt3.7□□□□□ -1.82
HRD1Q08109 FBP1YLR377C 1047 nt3.7□□□□□ -1.82
HRD1Q08109 POP4YBR257W 840 nt3.7□□□□□ -1.82
HRD1Q08109 LPL1YOR059C 1353 nt3.7□□□□□ -1.82
HRD1Q08109 IMD2YHR216W 1572 nt3.7□□□□□ -1.82
HRD1Q08109 ADP1YCR011C 3150 nt3.69□□□□□ -1.82
HRD1Q08109 GAD1YMR250W 1758 nt3.69□□□□□ -1.82
HRD1Q08109 UPS3YDR185C 540 nt3.69□□□□□ -1.82
HRD1Q08109 PAU17YLL025W 375 nt3.69□□□□□ -1.82
HRD1Q08109 YLR156WYLR156W 345 nt3.69□□□□□ -1.82
HRD1Q08109 YLR157W-DYLR157W-D 213 nt3.69□□□□□ -1.82
HRD1Q08109 YLR159WYLR159W 345 nt3.69□□□□□ -1.82
HRD1Q08109 YLR161WYLR161W 345 nt3.69□□□□□ -1.82
HRD1Q08109 CUS2YNL286W 858 nt3.69□□□□□ -1.82
HRD1Q08109 REX4YOL080C 870 nt3.69□□□□□ -1.82
HRD1Q08109 MFM1YPL060W 1242 nt3.69□□□□□ -1.82
HRD1Q08109 BCK2YER167W 2556 nt3.68□□□□□ -1.82
HRD1Q08109 NMD3YHR170W 1557 nt3.68□□□□□ -1.82
HRD1Q08109 PMT4YJR143C 2289 nt3.68□□□□□ -1.82
HRD1Q08109 LPP1YDR503C 825 nt3.68□□□□□ -1.82
HRD1Q08109 YGL088WYGL088W 366 nt3.68□□□□□ -1.82
HRD1Q08109 YPT53YNL093W 663 nt3.68□□□□□ -1.82
HRD1Q08109 REI1YBR267W 1182 nt3.68□□□□□ -1.82
HRD1Q08109 GAL11YOL051W 3246 nt3.67□□□□□ -1.82
HRD1Q08109 SLD2YKL108W 1362 nt3.67□□□□□ -1.82
HRD1Q08109 YDL012CYDL012C 324 nt3.67□□□□□ -1.82
HRD1Q08109 JAC1YGL018C 555 nt3.67□□□□□ -1.82
HRD1Q08109 YIL165CYIL165C 360 nt3.67□□□□□ -1.82
HRD1Q08109 ADD66YKL206C 804 nt3.67□□□□□ -1.82
HRD1Q08109 IDI1YPL117C 867 nt3.67□□□□□ -1.82
HRD1Q08109 ATG2YNL242W 4779 nt3.67□□□□□ -1.82
HRD1Q08109 XKS1YGR194C 1803 nt3.67□□□□□ -1.82
HRD1Q08109 VPS45YGL095C 1734 nt3.67□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 11.4 ms