Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CNTNAP1P78357 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC27.13■■□□□ 1.93
CNTNAP1P78357 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC27.13■■□□□ 1.93
CNTNAP1P78357 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
CNTNAP1P78357 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CNTNAP1P78357 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CNTNAP1P78357 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
CNTNAP1P78357 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC27.12■■□□□ 1.93
CNTNAP1P78357 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC27.12■■□□□ 1.93
CNTNAP1P78357 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.12■■□□□ 1.93
CNTNAP1P78357 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC27.12■■□□□ 1.93
CNTNAP1P78357 AC006015.1-201ENST00000429970 570 ntBASIC27.12■■□□□ 1.93
CNTNAP1P78357 PPP1R14BP3-201ENST00000509033 445 ntBASIC27.12■■□□□ 1.93
CNTNAP1P78357 MIR3181-201ENST00000578512 73 ntBASIC27.12■■□□□ 1.93
CNTNAP1P78357 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC27.12■■□□□ 1.93
CNTNAP1P78357 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CNTNAP1P78357 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
CNTNAP1P78357 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CNTNAP1P78357 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.12■■□□□ 1.93
CNTNAP1P78357 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CNTNAP1P78357 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CNTNAP1P78357 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CNTNAP1P78357 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC27.11■■□□□ 1.93
CNTNAP1P78357 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CNTNAP1P78357 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CNTNAP1P78357 NKILA-201ENST00000613231 537 ntTSL 4 BASIC27.11■■□□□ 1.93
CNTNAP1P78357 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CNTNAP1P78357 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC27.11■■□□□ 1.93
CNTNAP1P78357 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC27.11■■□□□ 1.93
CNTNAP1P78357 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CNTNAP1P78357 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC27.11■■□□□ 1.93
CNTNAP1P78357 AC145676.1-201ENST00000514988 2004 ntBASIC27.11■■□□□ 1.93
CNTNAP1P78357 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CNTNAP1P78357 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CNTNAP1P78357 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
CNTNAP1P78357 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
CNTNAP1P78357 MAP2K4P1-201ENST00000438453 1195 ntBASIC27.1■■□□□ 1.93
CNTNAP1P78357 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
CNTNAP1P78357 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CNTNAP1P78357 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CNTNAP1P78357 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.1■■□□□ 1.93
CNTNAP1P78357 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CNTNAP1P78357 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CNTNAP1P78357 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC27.1■■□□□ 1.93
CNTNAP1P78357 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CNTNAP1P78357 CD99P1-205ENST00000527459 561 ntBASIC27.09■■□□□ 1.93
CNTNAP1P78357 AICDA-202ENST00000537228 667 ntTSL 5 BASIC27.09■■□□□ 1.93
CNTNAP1P78357 AL354811.1-201ENST00000610286 706 ntBASIC27.09■■□□□ 1.93
CNTNAP1P78357 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC27.09■■□□□ 1.93
CNTNAP1P78357 AC009086.3-201ENST00000623486 1008 ntBASIC27.09■■□□□ 1.93
CNTNAP1P78357 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CNTNAP1P78357 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC27.09■■□□□ 1.93
CNTNAP1P78357 VGF-203ENST00000611537 1622 ntTSL 5 BASIC27.09■■□□□ 1.93
CNTNAP1P78357 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CNTNAP1P78357 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC27.09■■□□□ 1.93
CNTNAP1P78357 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC27.09■■□□□ 1.93
CNTNAP1P78357 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC27.09■■□□□ 1.93
CNTNAP1P78357 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC27.09■■□□□ 1.93
CNTNAP1P78357 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CNTNAP1P78357 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CNTNAP1P78357 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
CNTNAP1P78357 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
CNTNAP1P78357 USF2-207ENST00000595068 1612 ntTSL 5 BASIC27.08■■□□□ 1.93
CNTNAP1P78357 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CNTNAP1P78357 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC27.08■■□□□ 1.93
CNTNAP1P78357 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC27.08■■□□□ 1.93
CNTNAP1P78357 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC27.08■■□□□ 1.93
CNTNAP1P78357 AL109923.1-201ENST00000618799 583 ntBASIC27.08■■□□□ 1.93
CNTNAP1P78357 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC27.08■■□□□ 1.93
CNTNAP1P78357 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
CNTNAP1P78357 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.92
CNTNAP1P78357 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.92
CNTNAP1P78357 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.92
CNTNAP1P78357 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC27.08■■□□□ 1.92
CNTNAP1P78357 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC27.07■■□□□ 1.92
CNTNAP1P78357 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CNTNAP1P78357 HLA-L-211ENST00000482052 1765 ntBASIC27.07■■□□□ 1.92
CNTNAP1P78357 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CNTNAP1P78357 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CNTNAP1P78357 MIR572-201ENST00000384983 95 ntBASIC27.07■■□□□ 1.92
CNTNAP1P78357 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
CNTNAP1P78357 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC27.07■■□□□ 1.92
CNTNAP1P78357 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CNTNAP1P78357 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
CNTNAP1P78357 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC27.06■■□□□ 1.92
CNTNAP1P78357 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CNTNAP1P78357 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CNTNAP1P78357 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC27.06■■□□□ 1.92
CNTNAP1P78357 AC026185.1-201ENST00000445748 174 ntBASIC27.06■■□□□ 1.92
CNTNAP1P78357 TSPY20P-201ENST00000450910 630 ntBASIC27.06■■□□□ 1.92
CNTNAP1P78357 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC27.06■■□□□ 1.92
CNTNAP1P78357 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
CNTNAP1P78357 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CNTNAP1P78357 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC27.05■■□□□ 1.92
CNTNAP1P78357 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC27.05■■□□□ 1.92
CNTNAP1P78357 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CNTNAP1P78357 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC27.05■■□□□ 1.92
CNTNAP1P78357 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
CNTNAP1P78357 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.05■■□□□ 1.92
CNTNAP1P78357 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms