Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.53■□□□□ 0.72
CLDN12P56749 AL022069.1-201ENST00000568025 1636 ntBASIC19.53■□□□□ 0.72
CLDN12P56749 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.53■□□□□ 0.72
CLDN12P56749 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.52■□□□□ 0.72
CLDN12P56749 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN12P56749 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN12P56749 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.52■□□□□ 0.72
CLDN12P56749 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.52■□□□□ 0.72
CLDN12P56749 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN12P56749 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN12P56749 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CLDN12P56749 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN12P56749 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN12P56749 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
CLDN12P56749 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
CLDN12P56749 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.51■□□□□ 0.71
CLDN12P56749 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN12P56749 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN12P56749 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN12P56749 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
CLDN12P56749 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN12P56749 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN12P56749 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN12P56749 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.51■□□□□ 0.71
CLDN12P56749 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN12P56749 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN12P56749 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLDN12P56749 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN12P56749 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CLDN12P56749 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.51■□□□□ 0.71
CLDN12P56749 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.5■□□□□ 0.71
CLDN12P56749 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN12P56749 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN12P56749 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN12P56749 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN12P56749 AL592295.1-201ENST00000400984 884 ntBASIC19.5■□□□□ 0.71
CLDN12P56749 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.5■□□□□ 0.71
CLDN12P56749 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN12P56749 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN12P56749 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN12P56749 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN12P56749 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN12P56749 AC242852.2-201ENST00000615738 1807 ntBASIC19.49■□□□□ 0.71
CLDN12P56749 AL137060.1-201ENST00000618151 2648 ntBASIC19.49■□□□□ 0.71
CLDN12P56749 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN12P56749 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN12P56749 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN12P56749 GPX1-201ENST00000419349 1106 ntBASIC19.49■□□□□ 0.71
CLDN12P56749 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN12P56749 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN12P56749 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN12P56749 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN12P56749 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
CLDN12P56749 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN12P56749 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN12P56749 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN12P56749 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN12P56749 ALDH1A3-203ENST00000557963 1670 ntBASIC19.48■□□□□ 0.71
CLDN12P56749 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN12P56749 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN12P56749 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN12P56749 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CLDN12P56749 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CLDN12P56749 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN12P56749 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.47■□□□□ 0.71
CLDN12P56749 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN12P56749 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CLDN12P56749 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN12P56749 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN12P56749 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN12P56749 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN12P56749 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN12P56749 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN12P56749 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN12P56749 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.47■□□□□ 0.71
CLDN12P56749 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN12P56749 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN12P56749 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN12P56749 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN12P56749 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CLDN12P56749 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN12P56749 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN12P56749 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN12P56749 SPCS2P3-201ENST00000500401 656 ntBASIC19.46■□□□□ 0.71
CLDN12P56749 AC018755.3-202ENST00000596210 929 ntBASIC19.46■□□□□ 0.71
CLDN12P56749 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN12P56749 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN12P56749 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN12P56749 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN12P56749 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN12P56749 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN12P56749 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CLDN12P56749 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN12P56749 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN12P56749 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.45■□□□□ 0.7
CLDN12P56749 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN12P56749 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.45■□□□□ 0.7
CLDN12P56749 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.45■□□□□ 0.7
CLDN12P56749 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN12P56749 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms