Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH13P55290 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH13P55290 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CDH13P55290 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH13P55290 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.98■■□□□ 1.11
CDH13P55290 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH13P55290 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH13P55290 AC079630.1-202ENST00000618127 1840 ntBASIC21.98■■□□□ 1.11
CDH13P55290 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDH13P55290 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH13P55290 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH13P55290 KRT8P33-201ENST00000508125 1423 ntBASIC21.97■■□□□ 1.11
CDH13P55290 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.97■■□□□ 1.11
CDH13P55290 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDH13P55290 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH13P55290 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CDH13P55290 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.97■■□□□ 1.11
CDH13P55290 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.97■■□□□ 1.11
CDH13P55290 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.97■■□□□ 1.11
CDH13P55290 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDH13P55290 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.97■■□□□ 1.11
CDH13P55290 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.97■■□□□ 1.11
CDH13P55290 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH13P55290 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDH13P55290 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH13P55290 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CDH13P55290 EP400NL-214ENST00000641289 2402 ntBASIC21.97■■□□□ 1.11
CDH13P55290 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH13P55290 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.96■■□□□ 1.11
CDH13P55290 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.96■■□□□ 1.11
CDH13P55290 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CDH13P55290 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CDH13P55290 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CDH13P55290 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH13P55290 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.96■■□□□ 1.11
CDH13P55290 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH13P55290 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH13P55290 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH13P55290 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.96■■□□□ 1.11
CDH13P55290 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDH13P55290 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH13P55290 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDH13P55290 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDH13P55290 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDH13P55290 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CDH13P55290 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.95■■□□□ 1.1
CDH13P55290 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDH13P55290 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDH13P55290 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.95■■□□□ 1.1
CDH13P55290 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDH13P55290 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.94■■□□□ 1.1
CDH13P55290 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDH13P55290 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDH13P55290 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CDH13P55290 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDH13P55290 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDH13P55290 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDH13P55290 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDH13P55290 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.93■■□□□ 1.1
CDH13P55290 AC103724.3-201ENST00000564481 992 ntBASIC21.93■■□□□ 1.1
CDH13P55290 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH13P55290 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH13P55290 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH13P55290 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH13P55290 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH13P55290 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH13P55290 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH13P55290 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH13P55290 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CDH13P55290 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.92■■□□□ 1.1
CDH13P55290 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CDH13P55290 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.92■■□□□ 1.1
CDH13P55290 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH13P55290 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDH13P55290 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.91■■□□□ 1.1
CDH13P55290 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CDH13P55290 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDH13P55290 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH13P55290 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH13P55290 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH13P55290 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDH13P55290 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH13P55290 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDH13P55290 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH13P55290 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH13P55290 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.9■■□□□ 1.1
CDH13P55290 YBX1P4-201ENST00000392794 808 ntBASIC21.9■■□□□ 1.1
CDH13P55290 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.9■■□□□ 1.1
CDH13P55290 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDH13P55290 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH13P55290 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CDH13P55290 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CDH13P55290 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDH13P55290 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH13P55290 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDH13P55290 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.9■■□□□ 1.1
CDH13P55290 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.89■■□□□ 1.09
CDH13P55290 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CDH13P55290 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.89■■□□□ 1.09
CDH13P55290 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms