Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC25A1P53007 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC25A1P53007 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
SLC25A1P53007 ESRRAP2-201ENST00000418437 1549 ntBASIC20.02■□□□□ 0.79
SLC25A1P53007 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SLC25A1P53007 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SLC25A1P53007 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC25A1P53007 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC25A1P53007 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC25A1P53007 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SLC25A1P53007 GUSBP5-202ENST00000510805 1989 ntBASIC20.01■□□□□ 0.79
SLC25A1P53007 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC25A1P53007 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC25A1P53007 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20■□□□□ 0.79
SLC25A1P53007 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SLC25A1P53007 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC25A1P53007 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC25A1P53007 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20■□□□□ 0.79
SLC25A1P53007 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20■□□□□ 0.79
SLC25A1P53007 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC25A1P53007 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.99■□□□□ 0.79
SLC25A1P53007 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC25A1P53007 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC25A1P53007 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.99■□□□□ 0.79
SLC25A1P53007 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.99■□□□□ 0.79
SLC25A1P53007 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SLC25A1P53007 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC25A1P53007 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
SLC25A1P53007 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SLC25A1P53007 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SLC25A1P53007 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SLC25A1P53007 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC25A1P53007 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC25A1P53007 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC25A1P53007 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
SLC25A1P53007 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC25A1P53007 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.98■□□□□ 0.79
SLC25A1P53007 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.98■□□□□ 0.79
SLC25A1P53007 AC012354.3-201ENST00000623734 483 ntBASIC19.98■□□□□ 0.79
SLC25A1P53007 ECEL1P1-201ENST00000373592 1742 ntBASIC19.98■□□□□ 0.79
SLC25A1P53007 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SLC25A1P53007 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC25A1P53007 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC25A1P53007 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC25A1P53007 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC25A1P53007 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC25A1P53007 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC25A1P53007 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC25A1P53007 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC25A1P53007 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC25A1P53007 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC25A1P53007 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC25A1P53007 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.96■□□□□ 0.79
SLC25A1P53007 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC25A1P53007 AC103834.1-201ENST00000520383 144 ntBASIC19.96■□□□□ 0.79
SLC25A1P53007 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.96■□□□□ 0.79
SLC25A1P53007 SNX5-217ENST00000606557 1087 ntBASIC19.96■□□□□ 0.79
SLC25A1P53007 LINC00526-201ENST00000581067 1875 ntBASIC19.96■□□□□ 0.79
SLC25A1P53007 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC25A1P53007 AL353803.4-201ENST00000565882 1934 ntBASIC19.96■□□□□ 0.79
SLC25A1P53007 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC25A1P53007 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SLC25A1P53007 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.95■□□□□ 0.79
SLC25A1P53007 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.95■□□□□ 0.79
SLC25A1P53007 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
SLC25A1P53007 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC25A1P53007 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC25A1P53007 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC25A1P53007 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC25A1P53007 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC25A1P53007 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SLC25A1P53007 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC25A1P53007 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC25A1P53007 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC25A1P53007 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
SLC25A1P53007 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC25A1P53007 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SLC25A1P53007 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC25A1P53007 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC25A1P53007 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC25A1P53007 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
SLC25A1P53007 EP400NL-214ENST00000641289 2402 ntBASIC19.94■□□□□ 0.78
SLC25A1P53007 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC25A1P53007 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC25A1P53007 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC25A1P53007 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC25A1P53007 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SLC25A1P53007 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC25A1P53007 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC25A1P53007 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC25A1P53007 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC25A1P53007 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC25A1P53007 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC25A1P53007 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC25A1P53007 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC25A1P53007 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC25A1P53007 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC25A1P53007 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC25A1P53007 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC25A1P53007 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms