Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDX1P52945 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDX1P52945 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDX1P52945 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDX1P52945 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDX1P52945 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDX1P52945 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.82■■□□□ 1.08
PDX1P52945 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDX1P52945 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
PDX1P52945 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDX1P52945 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.82■■□□□ 1.08
PDX1P52945 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDX1P52945 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.82■■□□□ 1.08
PDX1P52945 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.82■■□□□ 1.08
PDX1P52945 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDX1P52945 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDX1P52945 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDX1P52945 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.82■■□□□ 1.08
PDX1P52945 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDX1P52945 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.82■■□□□ 1.08
PDX1P52945 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDX1P52945 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDX1P52945 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.81■■□□□ 1.08
PDX1P52945 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
PDX1P52945 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDX1P52945 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.81■■□□□ 1.08
PDX1P52945 MIR3181-201ENST00000578512 73 ntBASIC21.81■■□□□ 1.08
PDX1P52945 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.81■■□□□ 1.08
PDX1P52945 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDX1P52945 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.81■■□□□ 1.08
PDX1P52945 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDX1P52945 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.81■■□□□ 1.08
PDX1P52945 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDX1P52945 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PDX1P52945 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PDX1P52945 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDX1P52945 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PDX1P52945 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDX1P52945 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDX1P52945 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
PDX1P52945 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDX1P52945 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.8■■□□□ 1.08
PDX1P52945 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PDX1P52945 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.8■■□□□ 1.08
PDX1P52945 AC009086.3-201ENST00000623486 1008 ntBASIC21.8■■□□□ 1.08
PDX1P52945 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDX1P52945 LINC01124-201ENST00000409786 2117 ntBASIC21.8■■□□□ 1.08
PDX1P52945 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.8■■□□□ 1.08
PDX1P52945 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.8■■□□□ 1.08
PDX1P52945 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDX1P52945 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDX1P52945 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.79■■□□□ 1.08
PDX1P52945 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDX1P52945 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.79■■□□□ 1.08
PDX1P52945 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.79■■□□□ 1.08
PDX1P52945 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.79■■□□□ 1.08
PDX1P52945 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.79■■□□□ 1.08
PDX1P52945 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
PDX1P52945 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDX1P52945 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDX1P52945 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDX1P52945 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.78■■□□□ 1.08
PDX1P52945 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDX1P52945 AC233992.3-201ENST00000607491 485 ntBASIC21.78■■□□□ 1.08
PDX1P52945 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.78■■□□□ 1.08
PDX1P52945 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDX1P52945 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDX1P52945 BX842568.3-201ENST00000418104 571 ntBASIC21.77■■□□□ 1.08
PDX1P52945 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PDX1P52945 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.77■■□□□ 1.08
PDX1P52945 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PDX1P52945 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDX1P52945 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDX1P52945 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDX1P52945 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.76■■□□□ 1.07
PDX1P52945 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDX1P52945 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDX1P52945 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.76■■□□□ 1.07
PDX1P52945 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDX1P52945 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDX1P52945 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.76■■□□□ 1.07
PDX1P52945 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.76■■□□□ 1.07
PDX1P52945 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDX1P52945 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.76■■□□□ 1.07
PDX1P52945 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDX1P52945 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.75■■□□□ 1.07
PDX1P52945 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.75■■□□□ 1.07
PDX1P52945 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDX1P52945 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDX1P52945 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PDX1P52945 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PDX1P52945 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PDX1P52945 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDX1P52945 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDX1P52945 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDX1P52945 HLA-L-211ENST00000482052 1765 ntBASIC21.74■■□□□ 1.07
PDX1P52945 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDX1P52945 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDX1P52945 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.74■■□□□ 1.07
PDX1P52945 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms