Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.62■□□□□ 0.89
HMGA2P52926 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGA2P52926 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HMGA2P52926 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGA2P52926 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
HMGA2P52926 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.62■□□□□ 0.89
HMGA2P52926 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.61■□□□□ 0.89
HMGA2P52926 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGA2P52926 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGA2P52926 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.61■□□□□ 0.89
HMGA2P52926 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HMGA2P52926 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.61■□□□□ 0.89
HMGA2P52926 U85056.1-201ENST00000616429 682 ntBASIC20.61■□□□□ 0.89
HMGA2P52926 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGA2P52926 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGA2P52926 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGA2P52926 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HMGA2P52926 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HMGA2P52926 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HMGA2P52926 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGA2P52926 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HMGA2P52926 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGA2P52926 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGA2P52926 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HMGA2P52926 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGA2P52926 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
HMGA2P52926 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.6■□□□□ 0.89
HMGA2P52926 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.6■□□□□ 0.89
HMGA2P52926 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGA2P52926 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGA2P52926 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.6■□□□□ 0.89
HMGA2P52926 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGA2P52926 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.6■□□□□ 0.89
HMGA2P52926 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HMGA2P52926 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HMGA2P52926 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGA2P52926 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGA2P52926 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGA2P52926 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HMGA2P52926 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HMGA2P52926 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMGA2P52926 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.59■□□□□ 0.89
HMGA2P52926 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.59■□□□□ 0.89
HMGA2P52926 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.59■□□□□ 0.89
HMGA2P52926 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.59■□□□□ 0.89
HMGA2P52926 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMGA2P52926 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMGA2P52926 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HMGA2P52926 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HMGA2P52926 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMGA2P52926 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMGA2P52926 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.59■□□□□ 0.89
HMGA2P52926 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HMGA2P52926 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.59■□□□□ 0.89
HMGA2P52926 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGA2P52926 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGA2P52926 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMGA2P52926 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGA2P52926 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGA2P52926 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
HMGA2P52926 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGA2P52926 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.58■□□□□ 0.89
HMGA2P52926 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.58■□□□□ 0.89
HMGA2P52926 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.88
HMGA2P52926 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.57■□□□□ 0.88
HMGA2P52926 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.57■□□□□ 0.88
HMGA2P52926 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGA2P52926 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HMGA2P52926 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HMGA2P52926 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
HMGA2P52926 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
HMGA2P52926 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGA2P52926 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMGA2P52926 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.56■□□□□ 0.88
HMGA2P52926 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.56■□□□□ 0.88
HMGA2P52926 AF131216.4-201ENST00000638924 1588 ntBASIC20.56■□□□□ 0.88
HMGA2P52926 RARRES2P2-201ENST00000394842 485 ntBASIC20.56■□□□□ 0.88
HMGA2P52926 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.56■□□□□ 0.88
HMGA2P52926 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGA2P52926 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
HMGA2P52926 AL353803.4-201ENST00000565882 1934 ntBASIC20.55■□□□□ 0.88
HMGA2P52926 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
HMGA2P52926 KRT18P60-201ENST00000312876 1297 ntBASIC20.55■□□□□ 0.88
HMGA2P52926 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGA2P52926 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGA2P52926 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMGA2P52926 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGA2P52926 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGA2P52926 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGA2P52926 AC004448.1-201ENST00000458332 883 ntBASIC20.54■□□□□ 0.88
HMGA2P52926 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HMGA2P52926 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
HMGA2P52926 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HMGA2P52926 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGA2P52926 AC139530.1-201ENST00000575312 1977 ntBASIC20.54■□□□□ 0.88
HMGA2P52926 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGA2P52926 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGA2P52926 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGA2P52926 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
HMGA2P52926 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms