Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCN4P51793 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCN4P51793 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.82■■□□□ 1.4
CLCN4P51793 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCN4P51793 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.82■■□□□ 1.4
CLCN4P51793 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.82■■□□□ 1.4
CLCN4P51793 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.82■■□□□ 1.4
CLCN4P51793 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.82■■□□□ 1.4
CLCN4P51793 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCN4P51793 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCN4P51793 AC020928.2-201ENST00000588717 2197 ntBASIC23.82■■□□□ 1.4
CLCN4P51793 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.82■■□□□ 1.4
CLCN4P51793 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLCN4P51793 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.81■■□□□ 1.4
CLCN4P51793 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLCN4P51793 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLCN4P51793 KRT18P5-201ENST00000436075 1291 ntBASIC23.81■■□□□ 1.4
CLCN4P51793 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.81■■□□□ 1.4
CLCN4P51793 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.81■■□□□ 1.4
CLCN4P51793 AC022517.1-201ENST00000592429 346 ntBASIC23.81■■□□□ 1.4
CLCN4P51793 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLCN4P51793 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLCN4P51793 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLCN4P51793 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.81■■□□□ 1.4
CLCN4P51793 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLCN4P51793 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.81■■□□□ 1.4
CLCN4P51793 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.8■■□□□ 1.4
CLCN4P51793 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.8■■□□□ 1.4
CLCN4P51793 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.8■■□□□ 1.4
CLCN4P51793 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CLCN4P51793 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN4P51793 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN4P51793 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN4P51793 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.8■■□□□ 1.4
CLCN4P51793 IKBKGP1-201ENST00000612193 1073 ntBASIC23.8■■□□□ 1.4
CLCN4P51793 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN4P51793 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.8■■□□□ 1.4
CLCN4P51793 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN4P51793 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.8■■□□□ 1.4
CLCN4P51793 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.8■■□□□ 1.4
CLCN4P51793 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN4P51793 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN4P51793 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CLCN4P51793 AC027612.3-201ENST00000413684 1047 ntBASIC23.79■■□□□ 1.4
CLCN4P51793 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN4P51793 IGHV3-19-201ENST00000521488 291 ntBASIC23.79■■□□□ 1.4
CLCN4P51793 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN4P51793 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.79■■□□□ 1.4
CLCN4P51793 AL358852.1-201ENST00000623174 1268 ntBASIC23.79■■□□□ 1.4
CLCN4P51793 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN4P51793 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CLCN4P51793 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN4P51793 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.78■■□□□ 1.4
CLCN4P51793 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.78■■□□□ 1.4
CLCN4P51793 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CLCN4P51793 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CLCN4P51793 DUX4L2-201ENST00000561772 1275 ntBASIC23.78■■□□□ 1.4
CLCN4P51793 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.78■■□□□ 1.4
CLCN4P51793 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.78■■□□□ 1.4
CLCN4P51793 DUX4L6-201ENST00000626483 1275 ntBASIC23.78■■□□□ 1.4
CLCN4P51793 DUX4L1-201ENST00000627662 1275 ntBASIC23.78■■□□□ 1.4
CLCN4P51793 DUX4L8-201ENST00000629013 1275 ntBASIC23.78■■□□□ 1.4
CLCN4P51793 DUX4L3-201ENST00000630187 1275 ntBASIC23.78■■□□□ 1.4
CLCN4P51793 DUX4L7-201ENST00000630678 1275 ntBASIC23.78■■□□□ 1.4
CLCN4P51793 DUX4L5-201ENST00000630834 1275 ntBASIC23.78■■□□□ 1.4
CLCN4P51793 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.78■■□□□ 1.4
CLCN4P51793 RARRES2P11-201ENST00000635158 484 ntBASIC23.78■■□□□ 1.4
CLCN4P51793 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
CLCN4P51793 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLCN4P51793 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLCN4P51793 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.78■■□□□ 1.4
CLCN4P51793 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CLCN4P51793 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CLCN4P51793 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CLCN4P51793 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLCN4P51793 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.77■■□□□ 1.4
CLCN4P51793 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.77■■□□□ 1.4
CLCN4P51793 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CLCN4P51793 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CLCN4P51793 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.76■■□□□ 1.39
CLCN4P51793 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLCN4P51793 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.76■■□□□ 1.39
CLCN4P51793 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CLCN4P51793 MIR572-201ENST00000384983 95 ntBASIC23.76■■□□□ 1.39
CLCN4P51793 AC123595.1-201ENST00000440769 1046 ntBASIC23.76■■□□□ 1.39
CLCN4P51793 AC090192.1-201ENST00000517740 490 ntBASIC23.76■■□□□ 1.39
CLCN4P51793 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLCN4P51793 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CLCN4P51793 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLCN4P51793 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CLCN4P51793 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLCN4P51793 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CLCN4P51793 AC133637.1-201ENST00000624115 1537 ntBASIC23.75■■□□□ 1.39
CLCN4P51793 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.75■■□□□ 1.39
CLCN4P51793 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CLCN4P51793 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.75■■□□□ 1.39
CLCN4P51793 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLCN4P51793 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLCN4P51793 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.75■■□□□ 1.39
CLCN4P51793 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms