Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 AC004448.1-201ENST00000458332 883 ntBASIC21.28■■□□□ 1
CDKN2CP42773 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CDKN2CP42773 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDKN2CP42773 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CDKN2CP42773 GUSBP5-202ENST00000510805 1989 ntBASIC21.27■■□□□ 1
CDKN2CP42773 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDKN2CP42773 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.27■■□□□ 1
CDKN2CP42773 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.27■■□□□ 1
CDKN2CP42773 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.27■■□□□ 1
CDKN2CP42773 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDKN2CP42773 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.27■■□□□ 1
CDKN2CP42773 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDKN2CP42773 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.27■■□□□ 1
CDKN2CP42773 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.27■■□□□ 1
CDKN2CP42773 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDKN2CP42773 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CDKN2CP42773 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN2CP42773 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN2CP42773 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN2CP42773 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN2CP42773 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CDKN2CP42773 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN2CP42773 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN2CP42773 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.25■□□□□ 0.99
CDKN2CP42773 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CDKN2CP42773 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDKN2CP42773 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDKN2CP42773 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CDKN2CP42773 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDKN2CP42773 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDKN2CP42773 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.25■□□□□ 0.99
CDKN2CP42773 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDKN2CP42773 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.25■□□□□ 0.99
CDKN2CP42773 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDKN2CP42773 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.25■□□□□ 0.99
CDKN2CP42773 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.25■□□□□ 0.99
CDKN2CP42773 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.25■□□□□ 0.99
CDKN2CP42773 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDKN2CP42773 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDKN2CP42773 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.25■□□□□ 0.99
CDKN2CP42773 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.25■□□□□ 0.99
CDKN2CP42773 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CDKN2CP42773 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.24■□□□□ 0.99
CDKN2CP42773 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDKN2CP42773 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDKN2CP42773 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDKN2CP42773 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDKN2CP42773 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.24■□□□□ 0.99
CDKN2CP42773 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.24■□□□□ 0.99
CDKN2CP42773 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDKN2CP42773 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.24■□□□□ 0.99
CDKN2CP42773 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDKN2CP42773 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDKN2CP42773 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CDKN2CP42773 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDKN2CP42773 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDKN2CP42773 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDKN2CP42773 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDKN2CP42773 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDKN2CP42773 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.23■□□□□ 0.99
CDKN2CP42773 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDKN2CP42773 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDKN2CP42773 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDKN2CP42773 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.22■□□□□ 0.99
CDKN2CP42773 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.22■□□□□ 0.99
CDKN2CP42773 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKN2CP42773 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKN2CP42773 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKN2CP42773 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.22■□□□□ 0.99
CDKN2CP42773 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKN2CP42773 LINC00565-201ENST00000562710 2331 ntBASIC21.22■□□□□ 0.99
CDKN2CP42773 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKN2CP42773 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CDKN2CP42773 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKN2CP42773 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDKN2CP42773 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.21■□□□□ 0.99
CDKN2CP42773 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CDKN2CP42773 AC103834.1-201ENST00000520383 144 ntBASIC21.21■□□□□ 0.99
CDKN2CP42773 MIR4508-201ENST00000584178 70 ntBASIC21.21■□□□□ 0.99
CDKN2CP42773 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.21■□□□□ 0.99
CDKN2CP42773 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKN2CP42773 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKN2CP42773 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.2■□□□□ 0.98
CDKN2CP42773 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKN2CP42773 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
CDKN2CP42773 AL033527.3-201ENST00000566366 1196 ntBASIC21.2■□□□□ 0.98
CDKN2CP42773 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKN2CP42773 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKN2CP42773 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CDKN2CP42773 LINC00526-201ENST00000581067 1875 ntBASIC21.2■□□□□ 0.98
CDKN2CP42773 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKN2CP42773 CLDN5-201ENST00000403084 2357 ntBASIC21.19■□□□□ 0.98
CDKN2CP42773 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.19■□□□□ 0.98
CDKN2CP42773 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDKN2CP42773 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.19■□□□□ 0.98
CDKN2CP42773 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.19■□□□□ 0.98
CDKN2CP42773 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CDKN2CP42773 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKN2CP42773 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKN2CP42773 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms