Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
THBS4P35443 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
THBS4P35443 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.75■□□□□ 0.75
THBS4P35443 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
THBS4P35443 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
THBS4P35443 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
THBS4P35443 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
THBS4P35443 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.75■□□□□ 0.75
THBS4P35443 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.75■□□□□ 0.75
THBS4P35443 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.75■□□□□ 0.75
THBS4P35443 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
THBS4P35443 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.75■□□□□ 0.75
THBS4P35443 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
THBS4P35443 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
THBS4P35443 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.74■□□□□ 0.75
THBS4P35443 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.74■□□□□ 0.75
THBS4P35443 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.74■□□□□ 0.75
THBS4P35443 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
THBS4P35443 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
THBS4P35443 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
THBS4P35443 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
THBS4P35443 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
THBS4P35443 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
THBS4P35443 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
THBS4P35443 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
THBS4P35443 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
THBS4P35443 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.73■□□□□ 0.75
THBS4P35443 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
THBS4P35443 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
THBS4P35443 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
THBS4P35443 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
THBS4P35443 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.72■□□□□ 0.75
THBS4P35443 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
THBS4P35443 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
THBS4P35443 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.72■□□□□ 0.75
THBS4P35443 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.72■□□□□ 0.75
THBS4P35443 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.72■□□□□ 0.75
THBS4P35443 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
THBS4P35443 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.72■□□□□ 0.75
THBS4P35443 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
THBS4P35443 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
THBS4P35443 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
THBS4P35443 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.71■□□□□ 0.75
THBS4P35443 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.71■□□□□ 0.75
THBS4P35443 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
THBS4P35443 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
THBS4P35443 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.71■□□□□ 0.75
THBS4P35443 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.71■□□□□ 0.75
THBS4P35443 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
THBS4P35443 ANOS2P-203ENST00000472227 1816 ntBASIC19.71■□□□□ 0.75
THBS4P35443 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.71■□□□□ 0.75
THBS4P35443 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.71■□□□□ 0.75
THBS4P35443 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
THBS4P35443 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
THBS4P35443 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
THBS4P35443 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
THBS4P35443 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.7■□□□□ 0.74
THBS4P35443 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
THBS4P35443 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
THBS4P35443 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
THBS4P35443 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
THBS4P35443 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
THBS4P35443 AC131281.2-201ENST00000520478 145 ntBASIC19.7■□□□□ 0.74
THBS4P35443 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.7■□□□□ 0.74
THBS4P35443 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
THBS4P35443 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
THBS4P35443 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
THBS4P35443 AC005703.6-201ENST00000623265 1329 ntBASIC19.7■□□□□ 0.74
THBS4P35443 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.7■□□□□ 0.74
THBS4P35443 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.69■□□□□ 0.74
THBS4P35443 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.69■□□□□ 0.74
THBS4P35443 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
THBS4P35443 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
THBS4P35443 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
THBS4P35443 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.69■□□□□ 0.74
THBS4P35443 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
THBS4P35443 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
THBS4P35443 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
THBS4P35443 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.69■□□□□ 0.74
THBS4P35443 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.68■□□□□ 0.74
THBS4P35443 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
THBS4P35443 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
THBS4P35443 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
THBS4P35443 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
THBS4P35443 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
THBS4P35443 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.68■□□□□ 0.74
THBS4P35443 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.68■□□□□ 0.74
THBS4P35443 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
THBS4P35443 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.68■□□□□ 0.74
THBS4P35443 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
THBS4P35443 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
THBS4P35443 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
THBS4P35443 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
THBS4P35443 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
THBS4P35443 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
THBS4P35443 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
THBS4P35443 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
THBS4P35443 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.67■□□□□ 0.74
THBS4P35443 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
THBS4P35443 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms