Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKS2P33552 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CKS2P33552 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKS2P33552 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CKS2P33552 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKS2P33552 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.51■□□□□ 0.23
CKS2P33552 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKS2P33552 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKS2P33552 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CKS2P33552 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.5■□□□□ 0.23
CKS2P33552 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CKS2P33552 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC16.5■□□□□ 0.23
CKS2P33552 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.5■□□□□ 0.23
CKS2P33552 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKS2P33552 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.5■□□□□ 0.23
CKS2P33552 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CKS2P33552 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CKS2P33552 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CKS2P33552 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKS2P33552 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CKS2P33552 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.49■□□□□ 0.23
CKS2P33552 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.49■□□□□ 0.23
CKS2P33552 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.49■□□□□ 0.23
CKS2P33552 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC16.49■□□□□ 0.23
CKS2P33552 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC16.49■□□□□ 0.23
CKS2P33552 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.49■□□□□ 0.23
CKS2P33552 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CKS2P33552 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.49■□□□□ 0.23
CKS2P33552 ESRRAP2-201ENST00000418437 1549 ntBASIC16.49■□□□□ 0.23
CKS2P33552 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.49■□□□□ 0.23
CKS2P33552 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKS2P33552 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKS2P33552 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CKS2P33552 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKS2P33552 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKS2P33552 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKS2P33552 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CKS2P33552 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKS2P33552 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.48■□□□□ 0.23
CKS2P33552 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.48■□□□□ 0.23
CKS2P33552 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKS2P33552 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKS2P33552 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKS2P33552 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.48■□□□□ 0.23
CKS2P33552 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.47■□□□□ 0.23
CKS2P33552 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CKS2P33552 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CKS2P33552 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CKS2P33552 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CKS2P33552 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CKS2P33552 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.47■□□□□ 0.23
CKS2P33552 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
CKS2P33552 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CKS2P33552 AC025884.2-201ENST00000553429 711 ntBASIC16.47■□□□□ 0.23
CKS2P33552 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CKS2P33552 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CKS2P33552 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CKS2P33552 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CKS2P33552 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CKS2P33552 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
CKS2P33552 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CKS2P33552 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CKS2P33552 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CKS2P33552 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CKS2P33552 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CKS2P33552 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.46■□□□□ 0.23
CKS2P33552 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC16.46■□□□□ 0.23
CKS2P33552 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CKS2P33552 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC16.46■□□□□ 0.23
CKS2P33552 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC16.46■□□□□ 0.23
CKS2P33552 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CKS2P33552 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CKS2P33552 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CKS2P33552 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CKS2P33552 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CKS2P33552 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CKS2P33552 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.46■□□□□ 0.22
CKS2P33552 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.46■□□□□ 0.22
CKS2P33552 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CKS2P33552 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CKS2P33552 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CKS2P33552 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CKS2P33552 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CKS2P33552 KRT18P10-201ENST00000388836 1287 ntBASIC16.45■□□□□ 0.22
CKS2P33552 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.45■□□□□ 0.22
CKS2P33552 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC16.45■□□□□ 0.22
CKS2P33552 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CKS2P33552 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CKS2P33552 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.45■□□□□ 0.22
CKS2P33552 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
CKS2P33552 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.45■□□□□ 0.22
CKS2P33552 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CKS2P33552 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CKS2P33552 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CKS2P33552 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.45■□□□□ 0.22
CKS2P33552 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CKS2P33552 AL161729.1-201ENST00000604104 1402 ntBASIC16.45■□□□□ 0.22
CKS2P33552 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.44■□□□□ 0.22
CKS2P33552 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CKS2P33552 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms