Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 BET3YKR068C 582 nt5.64□□□□□ -1.51 RIP-Chip
PUB1P32588 CDC21YOR074C 915 nt5.64□□□□□ -1.51
PUB1P32588 YOR263CYOR263C 408 nt5.64□□□□□ -1.51
PUB1P32588 YOR289WYOR289W 756 nt5.64□□□□□ -1.51
PUB1P32588 UAF30YOR295W 687 nt5.64□□□□□ -1.51
PUB1P32588 UIP4YPL186C 915 nt5.64□□□□□ -1.51
PUB1P32588 YMC1YPR058W 924 nt5.64□□□□□ -1.51
PUB1P32588 MRPS9YBR146W 837 nt5.64□□□□□ -1.51
PUB1P32588 EXG1YLR300W 1347 nt5.64□□□□□ -1.51
PUB1P32588 RKM2YDR198C 1440 nt5.64□□□□□ -1.51 RIP-Chip
PUB1P32588 PUT1YLR142W 1431 nt5.64□□□□□ -1.51
PUB1P32588 YDR366CYDR366C 399 nt5.63□□□□□ -1.51
PUB1P32588 RTA1YGR213C 954 nt5.63□□□□□ -1.51
PUB1P32588 YHR070C-AYHR070C-A 411 nt5.63□□□□□ -1.51
PUB1P32588 NPA3YJR072C 1158 nt5.63□□□□□ -1.51
PUB1P32588 SPC3YLR066W 555 nt5.63□□□□□ -1.51 RIP-Chip
PUB1P32588 YMR193C-AYMR193C-A 387 nt5.63□□□□□ -1.51
PUB1P32588 YNL143CYNL143C 393 nt5.63□□□□□ -1.51
PUB1P32588 YNR040WYNR040W 771 nt5.63□□□□□ -1.51 RIP-Chip
PUB1P32588 ANT1YPR128C 987 nt5.63□□□□□ -1.51 RIP-Chip
PUB1P32588 MRPL37YBR268W 318 nt5.63□□□□□ -1.51
PUB1P32588 PRP24YMR268C 1335 nt5.63□□□□□ -1.51
PUB1P32588 TRM11YOL124C 1302 nt5.63□□□□□ -1.51
PUB1P32588 PGK1YCR012W 1251 nt5.62□□□□□ -1.51
PUB1P32588 PET100YDR079W 336 nt5.62□□□□□ -1.51 RIP-Chip
PUB1P32588 CAF16YFL028C 870 nt5.62□□□□□ -1.51
PUB1P32588 MRS1YIR021W 1092 nt5.62□□□□□ -1.51
PUB1P32588 KRE9YJL174W 831 nt5.62□□□□□ -1.51 RIP-Chip
PUB1P32588 YKL031WYKL031W 414 nt5.62□□□□□ -1.51
PUB1P32588 YML083CYML083C 1257 nt5.62□□□□□ -1.51
PUB1P32588 TRI1YMR233W 681 nt5.62□□□□□ -1.51
PUB1P32588 MRPS18YNL306W 654 nt5.62□□□□□ -1.51
PUB1P32588 RER2YBR002C 861 nt5.62□□□□□ -1.51
PUB1P32588 MLF3YNL074C 1359 nt5.62□□□□□ -1.51 RIP-Chip
PUB1P32588 AMD2YDR242W 1650 nt5.62□□□□□ -1.51
PUB1P32588 FET4YMR319C 1659 nt5.62□□□□□ -1.51
PUB1P32588 SLX5YDL013W 1860 nt5.61□□□□□ -1.51
PUB1P32588 YDR056CYDR056C 618 nt5.61□□□□□ -1.51
PUB1P32588 ASP1YDR321W 1146 nt5.61□□□□□ -1.51 RIP-Chip
PUB1P32588 ECM11YDR446W 909 nt5.61□□□□□ -1.51
PUB1P32588 KRE29YER038C 1395 nt5.61□□□□□ -1.51
PUB1P32588 MF(ALPHA)2YGL089C 363 nt5.61□□□□□ -1.51
PUB1P32588 COS12YGL263W 1143 nt5.61□□□□□ -1.51
PUB1P32588 YGR079WYGR079W 1113 nt5.61□□□□□ -1.51
PUB1P32588 YGR126WYGR126W 693 nt5.61□□□□□ -1.51 RIP-Chip
PUB1P32588 YGR219WYGR219W 342 nt5.61□□□□□ -1.51
PUB1P32588 OM45YIL136W 1182 nt5.61□□□□□ -1.51
PUB1P32588 CYC1YJR048W 330 nt5.61□□□□□ -1.51 RIP-Chip
PUB1P32588 VMA5YKL080W 1179 nt5.61□□□□□ -1.51 RIP-Chip
PUB1P32588 YJU3YKL094W 942 nt5.61□□□□□ -1.51
PUB1P32588 UTP30YKR060W 825 nt5.61□□□□□ -1.51
PUB1P32588 RNA1YMR235C 1224 nt5.61□□□□□ -1.51
PUB1P32588 YMR252CYMR252C 405 nt5.61□□□□□ -1.51 RIP-Chip
PUB1P32588 PTC3YBL056W 1407 nt5.61□□□□□ -1.51
PUB1P32588 PRP2YNR011C 2631 nt5.61□□□□□ -1.51
PUB1P32588 IZH2YOL002C 954 nt5.61□□□□□ -1.51 RIP-Chip
PUB1P32588 YOL036WYOL036W 2286 nt5.61□□□□□ -1.51
PUB1P32588 GPD2YOL059W 1323 nt5.61□□□□□ -1.51 RIP-Chip
PUB1P32588 NOC4YPR144C 1659 nt5.61□□□□□ -1.51 RIP-Chip
PUB1P32588 NPL4YBR170C 1743 nt5.61□□□□□ -1.51
PUB1P32588 NMD5YJR132W 3147 nt5.61□□□□□ -1.51
PUB1P32588 RIX7YLL034C 2514 nt5.6□□□□□ -1.51
PUB1P32588 GIP2YER054C 1647 nt5.6□□□□□ -1.51
PUB1P32588 HXT2YMR011W 1626 nt5.6□□□□□ -1.51 RIP-Chip
PUB1P32588 ADE13YLR359W 1449 nt5.6□□□□□ -1.51
PUB1P32588 SPT14YPL175W 1359 nt5.6□□□□□ -1.51
PUB1P32588 YER006C-AYER006C-A 318 nt5.6□□□□□ -1.51
PUB1P32588 YER181CYER181C 324 nt5.6□□□□□ -1.51
PUB1P32588 SEH1YGL100W 1050 nt5.6□□□□□ -1.51
PUB1P32588 YOL163WYOL163W 510 nt5.6□□□□□ -1.51
PUB1P32588 snR11snR11 258 nt5.6□□□□□ -1.51
PUB1P32588 IRC13YOR235W 315 nt5.6□□□□□ -1.51
PUB1P32588 MFM1YPL060W 1242 nt5.6□□□□□ -1.51
PUB1P32588 PDR18YNR070W 4002 nt5.59□□□□□ -1.51
PUB1P32588 PYK2YOR347C 1521 nt5.59□□□□□ -1.51 RIP-Chip
PUB1P32588 IDS2YJL146W 1410 nt5.59□□□□□ -1.51 RIP-Chip
PUB1P32588 RGD1YBR260C 2001 nt5.59□□□□□ -1.51
PUB1P32588 snR7-LsnR7-L 214 nt5.59□□□□□ -1.51
PUB1P32588 YDL186WYDL186W 834 nt5.59□□□□□ -1.51
PUB1P32588 YDR203WYDR203W 318 nt5.59□□□□□ -1.51
PUB1P32588 NOP16YER002W 696 nt5.59□□□□□ -1.51
PUB1P32588 GCG1YER163C 699 nt5.59□□□□□ -1.51
PUB1P32588 YGR293CYGR293C 462 nt5.59□□□□□ -1.51
PUB1P32588 EMG1YLR186W 759 nt5.59□□□□□ -1.51
PUB1P32588 VPS21YOR089C 633 nt5.59□□□□□ -1.51 RIP-Chip
PUB1P32588 IAH1YOR126C 717 nt5.59□□□□□ -1.51
PUB1P32588 RDL1YOR285W 420 nt5.59□□□□□ -1.51
PUB1P32588 MRPL40YPL173W 894 nt5.59□□□□□ -1.51
PUB1P32588 NRG2YBR066C 663 nt5.59□□□□□ -1.51
PUB1P32588 POL30YBR088C 777 nt5.59□□□□□ -1.51
PUB1P32588 snR44snR44 211 nt5.59□□□□□ -1.51
PUB1P32588 YBR300CYBR300C 498 nt5.59□□□□□ -1.51
PUB1P32588 YCL002CYCL002C 792 nt5.59□□□□□ -1.51 RIP-Chip
PUB1P32588 ILV1YER086W 1731 nt5.59□□□□□ -1.51
PUB1P32588 STB5YHR178W 2232 nt5.59□□□□□ -1.52
PUB1P32588 KEL1YHR158C 3495 nt5.58□□□□□ -1.52
PUB1P32588 YTP1YNL237W 1380 nt5.58□□□□□ -1.52
PUB1P32588 MNN5YJL186W 1761 nt5.58□□□□□ -1.52
PUB1P32588 SHU2YDR078C 672 nt5.58□□□□□ -1.52
PUB1P32588 VAB2YEL005C 849 nt5.58□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms