Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACKR3P25106 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.48■□□□□ 0.71
ACKR3P25106 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
ACKR3P25106 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ACKR3P25106 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACKR3P25106 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACKR3P25106 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACKR3P25106 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.47■□□□□ 0.71
ACKR3P25106 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ACKR3P25106 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACKR3P25106 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.47■□□□□ 0.71
ACKR3P25106 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACKR3P25106 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACKR3P25106 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ACKR3P25106 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.47■□□□□ 0.71
ACKR3P25106 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.47■□□□□ 0.71
ACKR3P25106 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.47■□□□□ 0.71
ACKR3P25106 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.47■□□□□ 0.71
ACKR3P25106 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ACKR3P25106 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ACKR3P25106 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.47■□□□□ 0.71
ACKR3P25106 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACKR3P25106 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ACKR3P25106 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACKR3P25106 AC021242.3-201ENST00000607598 1377 ntBASIC19.46■□□□□ 0.71
ACKR3P25106 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
ACKR3P25106 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACKR3P25106 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACKR3P25106 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACKR3P25106 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACKR3P25106 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACKR3P25106 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ACKR3P25106 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACKR3P25106 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACKR3P25106 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACKR3P25106 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACKR3P25106 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACKR3P25106 RARRES2P1-201ENST00000474487 481 ntBASIC19.45■□□□□ 0.7
ACKR3P25106 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
ACKR3P25106 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACKR3P25106 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.45■□□□□ 0.7
ACKR3P25106 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACKR3P25106 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACKR3P25106 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACKR3P25106 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACKR3P25106 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACKR3P25106 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ACKR3P25106 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACKR3P25106 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ACKR3P25106 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACKR3P25106 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.44■□□□□ 0.7
ACKR3P25106 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.44■□□□□ 0.7
ACKR3P25106 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.44■□□□□ 0.7
ACKR3P25106 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ACKR3P25106 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
ACKR3P25106 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ACKR3P25106 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.44■□□□□ 0.7
ACKR3P25106 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.44■□□□□ 0.7
ACKR3P25106 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ACKR3P25106 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACKR3P25106 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ACKR3P25106 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ACKR3P25106 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ACKR3P25106 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ACKR3P25106 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.43■□□□□ 0.7
ACKR3P25106 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACKR3P25106 AC079630.1-202ENST00000618127 1840 ntBASIC19.43■□□□□ 0.7
ACKR3P25106 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.43■□□□□ 0.7
ACKR3P25106 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACKR3P25106 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ACKR3P25106 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACKR3P25106 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACKR3P25106 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.42■□□□□ 0.7
ACKR3P25106 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACKR3P25106 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACKR3P25106 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACKR3P25106 BX664725.1-201ENST00000438252 379 ntBASIC19.42■□□□□ 0.7
ACKR3P25106 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.42■□□□□ 0.7
ACKR3P25106 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.42■□□□□ 0.7
ACKR3P25106 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.42■□□□□ 0.7
ACKR3P25106 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.42■□□□□ 0.7
ACKR3P25106 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.42■□□□□ 0.7
ACKR3P25106 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACKR3P25106 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACKR3P25106 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACKR3P25106 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ACKR3P25106 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACKR3P25106 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACKR3P25106 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.41■□□□□ 0.7
ACKR3P25106 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.41■□□□□ 0.7
ACKR3P25106 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.41■□□□□ 0.7
ACKR3P25106 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACKR3P25106 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACKR3P25106 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ACKR3P25106 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ACKR3P25106 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ACKR3P25106 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
ACKR3P25106 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ACKR3P25106 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACKR3P25106 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms