Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 TSPY11P-201ENST00000442607 1045 ntBASIC23.77■■□□□ 1.4
MMP8P22894 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MMP8P22894 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.76■■□□□ 1.39
MMP8P22894 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MMP8P22894 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MMP8P22894 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.76■■□□□ 1.39
MMP8P22894 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MMP8P22894 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.76■■□□□ 1.39
MMP8P22894 UNC93B8-201ENST00000511903 705 ntBASIC23.76■■□□□ 1.39
MMP8P22894 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
MMP8P22894 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.76■■□□□ 1.39
MMP8P22894 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
MMP8P22894 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
MMP8P22894 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MMP8P22894 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
MMP8P22894 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.75■■□□□ 1.39
MMP8P22894 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.75■■□□□ 1.39
MMP8P22894 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
MMP8P22894 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.75■■□□□ 1.39
MMP8P22894 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.75■■□□□ 1.39
MMP8P22894 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.74■■□□□ 1.39
MMP8P22894 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.74■■□□□ 1.39
MMP8P22894 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
MMP8P22894 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.74■■□□□ 1.39
MMP8P22894 AC133561.1-201ENST00000568600 2415 ntBASIC23.74■■□□□ 1.39
MMP8P22894 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MMP8P22894 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MMP8P22894 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.74■■□□□ 1.39
MMP8P22894 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
MMP8P22894 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.73■■□□□ 1.39
MMP8P22894 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.73■■□□□ 1.39
MMP8P22894 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
MMP8P22894 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
MMP8P22894 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
MMP8P22894 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.73■■□□□ 1.39
MMP8P22894 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
MMP8P22894 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
MMP8P22894 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.72■■□□□ 1.39
MMP8P22894 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.72■■□□□ 1.39
MMP8P22894 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
MMP8P22894 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.72■■□□□ 1.39
MMP8P22894 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.72■■□□□ 1.39
MMP8P22894 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.72■■□□□ 1.39
MMP8P22894 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.72■■□□□ 1.39
MMP8P22894 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.72■■□□□ 1.39
MMP8P22894 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
MMP8P22894 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
MMP8P22894 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
MMP8P22894 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
MMP8P22894 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.71■■□□□ 1.39
MMP8P22894 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
MMP8P22894 AC012676.1-201ENST00000574705 1949 ntBASIC23.71■■□□□ 1.39
MMP8P22894 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
MMP8P22894 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.71■■□□□ 1.39
MMP8P22894 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
MMP8P22894 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.71■■□□□ 1.39
MMP8P22894 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.71■■□□□ 1.39
MMP8P22894 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
MMP8P22894 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
MMP8P22894 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
MMP8P22894 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
MMP8P22894 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
MMP8P22894 GUSBP5-201ENST00000418136 578 ntBASIC23.7■■□□□ 1.38
MMP8P22894 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.7■■□□□ 1.38
MMP8P22894 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
MMP8P22894 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
MMP8P22894 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
MMP8P22894 AC144652.1-201ENST00000609974 1624 ntBASIC23.7■■□□□ 1.38
MMP8P22894 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MMP8P22894 AL353803.4-201ENST00000565882 1934 ntBASIC23.69■■□□□ 1.38
MMP8P22894 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
MMP8P22894 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
MMP8P22894 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.69■■□□□ 1.38
MMP8P22894 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.69■■□□□ 1.38
MMP8P22894 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.69■■□□□ 1.38
MMP8P22894 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
MMP8P22894 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
MMP8P22894 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
MMP8P22894 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MMP8P22894 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
MMP8P22894 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.67■■□□□ 1.38
MMP8P22894 MIR6724-1-201ENST00000616420 92 ntBASIC23.67■■□□□ 1.38
MMP8P22894 MIR6724-2-201ENST00000616483 92 ntBASIC23.67■■□□□ 1.38
MMP8P22894 MIR6724-4-201ENST00000617390 92 ntBASIC23.67■■□□□ 1.38
MMP8P22894 MIR6724-3-201ENST00000622482 92 ntBASIC23.67■■□□□ 1.38
MMP8P22894 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
MMP8P22894 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
MMP8P22894 AC009102.2-201ENST00000606772 1639 ntBASIC23.66■■□□□ 1.38
MMP8P22894 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
MMP8P22894 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
MMP8P22894 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
MMP8P22894 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.66■■□□□ 1.38
MMP8P22894 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
MMP8P22894 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
MMP8P22894 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
MMP8P22894 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.66■■□□□ 1.38
MMP8P22894 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
MMP8P22894 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
MMP8P22894 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.65■■□□□ 1.38
MMP8P22894 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms