Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1AP19438 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1AP19438 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TNFRSF1AP19438 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1AP19438 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1AP19438 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1AP19438 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1AP19438 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
TNFRSF1AP19438 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1AP19438 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1AP19438 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1AP19438 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1AP19438 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNFRSF1AP19438 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.02■□□□□ 0.64
TNFRSF1AP19438 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.02■□□□□ 0.64
TNFRSF1AP19438 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TNFRSF1AP19438 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF1AP19438 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TNFRSF1AP19438 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF1AP19438 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF1AP19438 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TNFRSF1AP19438 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF1AP19438 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TNFRSF1AP19438 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFRSF1AP19438 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.01■□□□□ 0.63
TNFRSF1AP19438 FP325331.1-202ENST00000623531 1380 ntBASIC19.01■□□□□ 0.63
TNFRSF1AP19438 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF1AP19438 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TNFRSF1AP19438 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF1AP19438 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF1AP19438 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF1AP19438 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
TNFRSF1AP19438 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19■□□□□ 0.63
TNFRSF1AP19438 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF1AP19438 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
TNFRSF1AP19438 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19■□□□□ 0.63
TNFRSF1AP19438 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19■□□□□ 0.63
TNFRSF1AP19438 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF1AP19438 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF1AP19438 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF1AP19438 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF1AP19438 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TNFRSF1AP19438 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFRSF1AP19438 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFRSF1AP19438 SYT6-210ENST00000641643 1587 ntBASIC18.99■□□□□ 0.63
TNFRSF1AP19438 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
TNFRSF1AP19438 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF1AP19438 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF1AP19438 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFRSF1AP19438 AC099791.2-201ENST00000605725 427 ntBASIC18.99■□□□□ 0.63
TNFRSF1AP19438 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.99■□□□□ 0.63
TNFRSF1AP19438 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFRSF1AP19438 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.99■□□□□ 0.63
TNFRSF1AP19438 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TNFRSF1AP19438 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF1AP19438 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF1AP19438 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF1AP19438 AC144652.1-201ENST00000609974 1624 ntBASIC18.99■□□□□ 0.63
TNFRSF1AP19438 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TNFRSF1AP19438 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.98■□□□□ 0.63
TNFRSF1AP19438 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TNFRSF1AP19438 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.98■□□□□ 0.63
TNFRSF1AP19438 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF1AP19438 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF1AP19438 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.98■□□□□ 0.63
TNFRSF1AP19438 AC009086.3-201ENST00000623486 1008 ntBASIC18.98■□□□□ 0.63
TNFRSF1AP19438 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.98■□□□□ 0.63
TNFRSF1AP19438 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF1AP19438 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF1AP19438 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF1AP19438 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.97■□□□□ 0.63
TNFRSF1AP19438 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.97■□□□□ 0.63
TNFRSF1AP19438 AC093323.1-202ENST00000635031 2045 ntBASIC18.97■□□□□ 0.63
TNFRSF1AP19438 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF1AP19438 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TNFRSF1AP19438 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF1AP19438 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TNFRSF1AP19438 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.97■□□□□ 0.63
TNFRSF1AP19438 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF1AP19438 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF1AP19438 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TNFRSF1AP19438 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF1AP19438 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF1AP19438 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TNFRSF1AP19438 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.96■□□□□ 0.63
TNFRSF1AP19438 AC096631.2-201ENST00000436136 790 ntBASIC18.96■□□□□ 0.63
TNFRSF1AP19438 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.96■□□□□ 0.63
TNFRSF1AP19438 LINC01529-204ENST00000636474 1715 ntBASIC18.96■□□□□ 0.63
TNFRSF1AP19438 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF1AP19438 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
TNFRSF1AP19438 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TNFRSF1AP19438 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF1AP19438 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF1AP19438 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF1AP19438 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF1AP19438 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF1AP19438 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF1AP19438 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF1AP19438 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF1AP19438 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms