Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FREM3P0C091 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FREM3P0C091 DUX4L19-201ENST00000557448 1267 ntBASIC20.48■□□□□ 0.87
FREM3P0C091 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FREM3P0C091 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
FREM3P0C091 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FREM3P0C091 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FREM3P0C091 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.48■□□□□ 0.87
FREM3P0C091 AL139246.5-201ENST00000606645 996 ntBASIC20.48■□□□□ 0.87
FREM3P0C091 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.48■□□□□ 0.87
FREM3P0C091 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.48■□□□□ 0.87
FREM3P0C091 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FREM3P0C091 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FREM3P0C091 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
FREM3P0C091 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FREM3P0C091 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
FREM3P0C091 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FREM3P0C091 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FREM3P0C091 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
FREM3P0C091 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.47■□□□□ 0.87
FREM3P0C091 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FREM3P0C091 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
FREM3P0C091 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
FREM3P0C091 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
FREM3P0C091 AC006455.2-201ENST00000429931 906 ntBASIC20.47■□□□□ 0.87
FREM3P0C091 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
FREM3P0C091 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FREM3P0C091 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FREM3P0C091 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FREM3P0C091 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FREM3P0C091 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
FREM3P0C091 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FREM3P0C091 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.46■□□□□ 0.87
FREM3P0C091 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
FREM3P0C091 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.87
FREM3P0C091 UNC93B3-201ENST00000308076 687 ntBASIC20.45■□□□□ 0.86
FREM3P0C091 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FREM3P0C091 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.45■□□□□ 0.86
FREM3P0C091 AC099791.2-201ENST00000605725 427 ntBASIC20.45■□□□□ 0.86
FREM3P0C091 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FREM3P0C091 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.45■□□□□ 0.86
FREM3P0C091 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FREM3P0C091 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FREM3P0C091 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FREM3P0C091 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FREM3P0C091 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FREM3P0C091 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.45■□□□□ 0.86
FREM3P0C091 AL031432.3-201ENST00000607698 485 ntBASIC20.45■□□□□ 0.86
FREM3P0C091 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.45■□□□□ 0.86
FREM3P0C091 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FREM3P0C091 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FREM3P0C091 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FREM3P0C091 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FREM3P0C091 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FREM3P0C091 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
FREM3P0C091 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.44■□□□□ 0.86
FREM3P0C091 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
FREM3P0C091 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FREM3P0C091 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FREM3P0C091 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FREM3P0C091 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FREM3P0C091 AL161729.1-201ENST00000604104 1402 ntBASIC20.43■□□□□ 0.86
FREM3P0C091 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FREM3P0C091 SERBP1P1-201ENST00000396021 1160 ntBASIC20.43■□□□□ 0.86
FREM3P0C091 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.43■□□□□ 0.86
FREM3P0C091 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FREM3P0C091 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
FREM3P0C091 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
FREM3P0C091 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
FREM3P0C091 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
FREM3P0C091 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
FREM3P0C091 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FREM3P0C091 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FREM3P0C091 SYT6-210ENST00000641643 1587 ntBASIC20.42■□□□□ 0.86
FREM3P0C091 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
FREM3P0C091 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
FREM3P0C091 AC079630.1-202ENST00000618127 1840 ntBASIC20.42■□□□□ 0.86
FREM3P0C091 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FREM3P0C091 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FREM3P0C091 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
FREM3P0C091 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.41■□□□□ 0.86
FREM3P0C091 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.41■□□□□ 0.86
FREM3P0C091 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FREM3P0C091 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
FREM3P0C091 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
FREM3P0C091 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FREM3P0C091 AC135279.3-201ENST00000610945 1311 ntBASIC20.41■□□□□ 0.86
FREM3P0C091 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.41■□□□□ 0.86
FREM3P0C091 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.41■□□□□ 0.86
FREM3P0C091 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
FREM3P0C091 ZNRF2P3-201ENST00000424200 374 ntBASIC20.41■□□□□ 0.86
FREM3P0C091 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.41■□□□□ 0.86
FREM3P0C091 AC133561.4-201ENST00000566112 224 ntBASIC20.41■□□□□ 0.86
FREM3P0C091 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
FREM3P0C091 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.4■□□□□ 0.86
FREM3P0C091 PBX2P1-201ENST00000493219 1291 ntBASIC20.4■□□□□ 0.86
FREM3P0C091 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.4■□□□□ 0.86
FREM3P0C091 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FREM3P0C091 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
FREM3P0C091 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms