Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.38■■□□□ 1.33
CD48P09326 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CD48P09326 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
CD48P09326 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CD48P09326 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.38■■□□□ 1.33
CD48P09326 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CD48P09326 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
CD48P09326 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CD48P09326 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CD48P09326 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
CD48P09326 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.38■■□□□ 1.33
CD48P09326 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CD48P09326 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CD48P09326 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CD48P09326 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.37■■□□□ 1.33
CD48P09326 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CD48P09326 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CD48P09326 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CD48P09326 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.37■■□□□ 1.33
CD48P09326 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CD48P09326 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CD48P09326 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CD48P09326 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.36■■□□□ 1.33
CD48P09326 AC012676.1-201ENST00000574705 1949 ntBASIC23.36■■□□□ 1.33
CD48P09326 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CD48P09326 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CD48P09326 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
CD48P09326 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CD48P09326 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.36■■□□□ 1.33
CD48P09326 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
CD48P09326 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CD48P09326 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CD48P09326 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
CD48P09326 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.35■■□□□ 1.33
CD48P09326 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CD48P09326 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CD48P09326 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
CD48P09326 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
CD48P09326 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.35■■□□□ 1.33
CD48P09326 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CD48P09326 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CD48P09326 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.34■■□□□ 1.33
CD48P09326 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CD48P09326 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.34■■□□□ 1.33
CD48P09326 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
CD48P09326 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.33■■□□□ 1.33
CD48P09326 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
CD48P09326 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CD48P09326 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CD48P09326 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CD48P09326 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.33■■□□□ 1.32
CD48P09326 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
CD48P09326 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.32■■□□□ 1.32
CD48P09326 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CD48P09326 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
CD48P09326 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CD48P09326 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CD48P09326 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CD48P09326 TSPY9P-201ENST00000440215 945 ntBASIC23.32■■□□□ 1.32
CD48P09326 TSPY11P-201ENST00000442607 1045 ntBASIC23.32■■□□□ 1.32
CD48P09326 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CD48P09326 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CD48P09326 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CD48P09326 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.32■■□□□ 1.32
CD48P09326 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CD48P09326 AC005703.6-201ENST00000623265 1329 ntBASIC23.32■■□□□ 1.32
CD48P09326 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CD48P09326 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CD48P09326 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CD48P09326 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CD48P09326 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CD48P09326 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.31■■□□□ 1.32
CD48P09326 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
CD48P09326 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CD48P09326 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CD48P09326 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
CD48P09326 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.3■■□□□ 1.32
CD48P09326 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CD48P09326 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CD48P09326 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CD48P09326 C1orf229-201ENST00000623686 2258 ntBASIC23.3■■□□□ 1.32
CD48P09326 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CD48P09326 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CD48P09326 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CD48P09326 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.3■■□□□ 1.32
CD48P09326 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.3■■□□□ 1.32
CD48P09326 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.3■■□□□ 1.32
CD48P09326 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.3■■□□□ 1.32
CD48P09326 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CD48P09326 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CD48P09326 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
CD48P09326 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.29■■□□□ 1.32
CD48P09326 MTDHP2-201ENST00000601468 714 ntBASIC23.29■■□□□ 1.32
CD48P09326 AL035685.1-201ENST00000636663 812 ntBASIC23.29■■□□□ 1.32
CD48P09326 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CD48P09326 AL353803.4-201ENST00000565882 1934 ntBASIC23.29■■□□□ 1.32
CD48P09326 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CD48P09326 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.29■■□□□ 1.32
CD48P09326 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.28■■□□□ 1.32
CD48P09326 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms