Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC133637.1-201ENST00000624115 1537 ntBASIC30.16■■■□□ 2.42
COL5A2P05997 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
COL5A2P05997 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
COL5A2P05997 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
COL5A2P05997 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
COL5A2P05997 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC30.15■■■□□ 2.42
COL5A2P05997 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
COL5A2P05997 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC30.15■■■□□ 2.42
COL5A2P05997 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
COL5A2P05997 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
COL5A2P05997 ALDH1A3-203ENST00000557963 1670 ntBASIC30.14■■■□□ 2.42
COL5A2P05997 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC30.14■■■□□ 2.42
COL5A2P05997 OR2I1P-207ENST00000453522 948 ntBASIC30.13■■■□□ 2.41
COL5A2P05997 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC30.13■■■□□ 2.41
COL5A2P05997 LINC02228-203ENST00000641970 1355 ntBASIC30.13■■■□□ 2.41
COL5A2P05997 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
COL5A2P05997 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
COL5A2P05997 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
COL5A2P05997 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC30.12■■■□□ 2.41
COL5A2P05997 CEBPA-AS1-201ENST00000592982 2198 ntBASIC30.12■■■□□ 2.41
COL5A2P05997 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
COL5A2P05997 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
COL5A2P05997 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.12■■■□□ 2.41
COL5A2P05997 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC30.12■■■□□ 2.41
COL5A2P05997 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
COL5A2P05997 RAP2CP1-201ENST00000605103 478 ntBASIC30.12■■■□□ 2.41
COL5A2P05997 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC30.11■■■□□ 2.41
COL5A2P05997 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
COL5A2P05997 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC30.11■■■□□ 2.41
COL5A2P05997 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
COL5A2P05997 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
COL5A2P05997 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC30.11■■■□□ 2.41
COL5A2P05997 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
COL5A2P05997 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC30.11■■■□□ 2.41
COL5A2P05997 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
COL5A2P05997 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC30.11■■■□□ 2.41
COL5A2P05997 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
COL5A2P05997 AL499627.2-201ENST00000606283 725 ntBASIC30.11■■■□□ 2.41
COL5A2P05997 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
COL5A2P05997 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
COL5A2P05997 DUSP8P4-201ENST00000399538 1761 ntBASIC30.1■■■□□ 2.41
COL5A2P05997 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
COL5A2P05997 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
COL5A2P05997 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC30.1■■■□□ 2.41
COL5A2P05997 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
COL5A2P05997 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
COL5A2P05997 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
COL5A2P05997 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
COL5A2P05997 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC30.09■■■□□ 2.41
COL5A2P05997 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
COL5A2P05997 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
COL5A2P05997 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC30.09■■■□□ 2.41
COL5A2P05997 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
COL5A2P05997 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
COL5A2P05997 EI24-204ENST00000527235 1625 ntTSL 5 BASIC30.09■■■□□ 2.41
COL5A2P05997 HLA-L-211ENST00000482052 1765 ntBASIC30.08■■■□□ 2.41
COL5A2P05997 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
COL5A2P05997 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
COL5A2P05997 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
COL5A2P05997 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
COL5A2P05997 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
COL5A2P05997 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
COL5A2P05997 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
COL5A2P05997 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC30.08■■■□□ 2.41
COL5A2P05997 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
COL5A2P05997 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
COL5A2P05997 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC30.08■■■□□ 2.41
COL5A2P05997 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC30.07■■■□□ 2.41
COL5A2P05997 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
COL5A2P05997 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
COL5A2P05997 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC30.07■■■□□ 2.4
COL5A2P05997 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC30.07■■■□□ 2.4
COL5A2P05997 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC30.07■■■□□ 2.4
COL5A2P05997 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC30.07■■■□□ 2.4
COL5A2P05997 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
COL5A2P05997 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC30.07■■■□□ 2.4
COL5A2P05997 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
COL5A2P05997 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC30.07■■■□□ 2.4
COL5A2P05997 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
COL5A2P05997 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
COL5A2P05997 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
COL5A2P05997 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
COL5A2P05997 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC30.06■■■□□ 2.4
COL5A2P05997 AC006015.1-201ENST00000429970 570 ntBASIC30.06■■■□□ 2.4
COL5A2P05997 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC30.06■■■□□ 2.4
COL5A2P05997 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
COL5A2P05997 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
COL5A2P05997 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC30.06■■■□□ 2.4
COL5A2P05997 NT5C3AP1-201ENST00000394500 1012 ntBASIC30.06■■■□□ 2.4
COL5A2P05997 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
COL5A2P05997 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC30.06■■■□□ 2.4
COL5A2P05997 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
COL5A2P05997 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
COL5A2P05997 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
COL5A2P05997 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
COL5A2P05997 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC30.05■■■□□ 2.4
COL5A2P05997 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
COL5A2P05997 LHPP-203ENST00000392757 840 ntTSL 3 BASIC30.05■■■□□ 2.4
COL5A2P05997 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC30.05■■■□□ 2.4
COL5A2P05997 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC30.05■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms