Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
MT-ND1P03886 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
MT-ND1P03886 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-ND1P03886 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-ND1P03886 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
MT-ND1P03886 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.15■□□□□ 0.98
MT-ND1P03886 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.15■□□□□ 0.98
MT-ND1P03886 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
MT-ND1P03886 HSD17B1P1-201ENST00000590052 955 ntBASIC21.15■□□□□ 0.98
MT-ND1P03886 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MT-ND1P03886 AL137060.1-201ENST00000618151 2648 ntBASIC21.15■□□□□ 0.98
MT-ND1P03886 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MT-ND1P03886 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-ND1P03886 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-ND1P03886 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.14■□□□□ 0.98
MT-ND1P03886 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
MT-ND1P03886 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MT-ND1P03886 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
MT-ND1P03886 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.14■□□□□ 0.97
MT-ND1P03886 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.14■□□□□ 0.97
MT-ND1P03886 MIR6765-201ENST00000614092 87 ntBASIC21.14■□□□□ 0.97
MT-ND1P03886 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.14■□□□□ 0.97
MT-ND1P03886 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
MT-ND1P03886 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.14■□□□□ 0.97
MT-ND1P03886 AC137767.1-201ENST00000602918 1920 ntBASIC21.14■□□□□ 0.97
MT-ND1P03886 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
MT-ND1P03886 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND1P03886 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
MT-ND1P03886 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND1P03886 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND1P03886 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND1P03886 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND1P03886 DUX4L9-201ENST00000449051 1259 ntBASIC21.13■□□□□ 0.97
MT-ND1P03886 AC087393.1-201ENST00000582896 145 ntBASIC21.13■□□□□ 0.97
MT-ND1P03886 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND1P03886 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
MT-ND1P03886 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.13■□□□□ 0.97
MT-ND1P03886 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND1P03886 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND1P03886 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND1P03886 AL161729.1-201ENST00000604104 1402 ntBASIC21.12■□□□□ 0.97
MT-ND1P03886 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MT-ND1P03886 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
MT-ND1P03886 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MT-ND1P03886 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.12■□□□□ 0.97
MT-ND1P03886 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MT-ND1P03886 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MT-ND1P03886 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MT-ND1P03886 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
MT-ND1P03886 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
MT-ND1P03886 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MT-ND1P03886 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.12■□□□□ 0.97
MT-ND1P03886 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.12■□□□□ 0.97
MT-ND1P03886 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MT-ND1P03886 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
MT-ND1P03886 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.11■□□□□ 0.97
MT-ND1P03886 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
MT-ND1P03886 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MT-ND1P03886 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.11■□□□□ 0.97
MT-ND1P03886 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.11■□□□□ 0.97
MT-ND1P03886 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.11■□□□□ 0.97
MT-ND1P03886 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MT-ND1P03886 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.11■□□□□ 0.97
MT-ND1P03886 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.11■□□□□ 0.97
MT-ND1P03886 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
MT-ND1P03886 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-ND1P03886 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-ND1P03886 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-ND1P03886 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
MT-ND1P03886 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-ND1P03886 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-ND1P03886 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
MT-ND1P03886 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-ND1P03886 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MT-ND1P03886 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
MT-ND1P03886 U85056.1-201ENST00000616429 682 ntBASIC21.1■□□□□ 0.97
MT-ND1P03886 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-ND1P03886 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MT-ND1P03886 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-ND1P03886 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MT-ND1P03886 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MT-ND1P03886 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
MT-ND1P03886 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MT-ND1P03886 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MT-ND1P03886 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-ND1P03886 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-ND1P03886 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.09■□□□□ 0.97
MT-ND1P03886 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
MT-ND1P03886 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MT-ND1P03886 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
MT-ND1P03886 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MT-ND1P03886 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.09■□□□□ 0.97
MT-ND1P03886 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.09■□□□□ 0.97
MT-ND1P03886 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.09■□□□□ 0.97
MT-ND1P03886 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.09■□□□□ 0.97
MT-ND1P03886 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
MT-ND1P03886 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
MT-ND1P03886 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MT-ND1P03886 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
MT-ND1P03886 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms