Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3DO95716 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RAB3DO95716 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.09■□□□□ 0.65
RAB3DO95716 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
RAB3DO95716 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3DO95716 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RAB3DO95716 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3DO95716 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3DO95716 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3DO95716 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAB3DO95716 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.08■□□□□ 0.65
RAB3DO95716 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAB3DO95716 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.08■□□□□ 0.64
RAB3DO95716 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RAB3DO95716 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAB3DO95716 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAB3DO95716 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB3DO95716 AC090877.2-201ENST00000558441 1738 ntBASIC19.08■□□□□ 0.64
RAB3DO95716 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RAB3DO95716 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAB3DO95716 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB3DO95716 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.07■□□□□ 0.64
RAB3DO95716 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.07■□□□□ 0.64
RAB3DO95716 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.07■□□□□ 0.64
RAB3DO95716 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB3DO95716 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.07■□□□□ 0.64
RAB3DO95716 ECEL1P2-201ENST00000461596 1295 ntBASIC19.07■□□□□ 0.64
RAB3DO95716 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.07■□□□□ 0.64
RAB3DO95716 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
RAB3DO95716 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB3DO95716 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB3DO95716 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB3DO95716 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB3DO95716 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.07■□□□□ 0.64
RAB3DO95716 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB3DO95716 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAB3DO95716 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAB3DO95716 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
RAB3DO95716 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
RAB3DO95716 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3DO95716 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3DO95716 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3DO95716 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3DO95716 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RAB3DO95716 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3DO95716 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.06■□□□□ 0.64
RAB3DO95716 MIR3648-2-201ENST00000581792 180 ntBASIC19.06■□□□□ 0.64
RAB3DO95716 MIR3648-1-201ENST00000615959 180 ntBASIC19.06■□□□□ 0.64
RAB3DO95716 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3DO95716 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3DO95716 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3DO95716 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RAB3DO95716 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3DO95716 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3DO95716 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3DO95716 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3DO95716 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3DO95716 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3DO95716 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RAB3DO95716 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
RAB3DO95716 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RAB3DO95716 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3DO95716 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
RAB3DO95716 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RAB3DO95716 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3DO95716 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RAB3DO95716 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3DO95716 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RAB3DO95716 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3DO95716 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3DO95716 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB3DO95716 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3DO95716 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RAB3DO95716 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3DO95716 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RAB3DO95716 RPS2P35-201ENST00000443417 897 ntBASIC19.04■□□□□ 0.64
RAB3DO95716 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB3DO95716 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3DO95716 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB3DO95716 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3DO95716 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3DO95716 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3DO95716 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.03■□□□□ 0.64
RAB3DO95716 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3DO95716 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3DO95716 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.03■□□□□ 0.64
RAB3DO95716 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RAB3DO95716 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.03■□□□□ 0.64
RAB3DO95716 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3DO95716 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3DO95716 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3DO95716 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3DO95716 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB3DO95716 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB3DO95716 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB3DO95716 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.02■□□□□ 0.64
RAB3DO95716 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB3DO95716 AL022069.1-201ENST00000568025 1636 ntBASIC19.02■□□□□ 0.64
RAB3DO95716 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.02■□□□□ 0.64
RAB3DO95716 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms