Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC106739.1-201ENST00000617035 715 ntBASIC26.96■■□□□ 1.91
MBD4O95243 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
MBD4O95243 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.96■■□□□ 1.91
MBD4O95243 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.91
MBD4O95243 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
MBD4O95243 AC135279.3-201ENST00000610945 1311 ntBASIC26.95■■□□□ 1.91
MBD4O95243 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.95■■□□□ 1.9
MBD4O95243 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
MBD4O95243 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
MBD4O95243 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.95■■□□□ 1.9
MBD4O95243 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
MBD4O95243 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
MBD4O95243 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
MBD4O95243 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
MBD4O95243 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
MBD4O95243 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
MBD4O95243 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.94■■□□□ 1.9
MBD4O95243 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
MBD4O95243 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.94■■□□□ 1.9
MBD4O95243 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
MBD4O95243 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC26.94■■□□□ 1.9
MBD4O95243 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.94■■□□□ 1.9
MBD4O95243 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
MBD4O95243 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
MBD4O95243 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
MBD4O95243 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
MBD4O95243 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
MBD4O95243 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
MBD4O95243 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
MBD4O95243 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
MBD4O95243 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.93■■□□□ 1.9
MBD4O95243 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.93■■□□□ 1.9
MBD4O95243 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
MBD4O95243 AC093323.1-202ENST00000635031 2045 ntBASIC26.93■■□□□ 1.9
MBD4O95243 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
MBD4O95243 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
MBD4O95243 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
MBD4O95243 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
MBD4O95243 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
MBD4O95243 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
MBD4O95243 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.92■■□□□ 1.9
MBD4O95243 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
MBD4O95243 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
MBD4O95243 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
MBD4O95243 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
MBD4O95243 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.92■■□□□ 1.9
MBD4O95243 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.92■■□□□ 1.9
MBD4O95243 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
MBD4O95243 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
MBD4O95243 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
MBD4O95243 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
MBD4O95243 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
MBD4O95243 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
MBD4O95243 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
MBD4O95243 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.91■■□□□ 1.9
MBD4O95243 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.91■■□□□ 1.9
MBD4O95243 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.91■■□□□ 1.9
MBD4O95243 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
MBD4O95243 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
MBD4O95243 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
MBD4O95243 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
MBD4O95243 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.9■■□□□ 1.9
MBD4O95243 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
MBD4O95243 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
MBD4O95243 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
MBD4O95243 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.9■■□□□ 1.9
MBD4O95243 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.9■■□□□ 1.9
MBD4O95243 MIR3181-201ENST00000578512 73 ntBASIC26.9■■□□□ 1.9
MBD4O95243 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
MBD4O95243 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
MBD4O95243 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.9■■□□□ 1.9
MBD4O95243 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
MBD4O95243 AC019069.1-201ENST00000610008 1333 ntBASIC26.9■■□□□ 1.9
MBD4O95243 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.89■■□□□ 1.9
MBD4O95243 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
MBD4O95243 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
MBD4O95243 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
MBD4O95243 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.89■■□□□ 1.9
MBD4O95243 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.89■■□□□ 1.9
MBD4O95243 AC133561.4-201ENST00000566112 224 ntBASIC26.89■■□□□ 1.9
MBD4O95243 AC005837.3-201ENST00000612163 286 ntBASIC26.89■■□□□ 1.9
MBD4O95243 AC144652.1-201ENST00000609974 1624 ntBASIC26.89■■□□□ 1.9
MBD4O95243 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
MBD4O95243 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
MBD4O95243 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.88■■□□□ 1.89
MBD4O95243 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
MBD4O95243 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
MBD4O95243 AC079630.1-202ENST00000618127 1840 ntBASIC26.88■■□□□ 1.89
MBD4O95243 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.87■■□□□ 1.89
MBD4O95243 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.87■■□□□ 1.89
MBD4O95243 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.87■■□□□ 1.89
MBD4O95243 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.87■■□□□ 1.89
MBD4O95243 MIR4767-201ENST00000582827 78 ntBASIC26.87■■□□□ 1.89
MBD4O95243 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.87■■□□□ 1.89
MBD4O95243 AL031432.3-201ENST00000607698 485 ntBASIC26.87■■□□□ 1.89
MBD4O95243 pRNA.6-201ENST00000610482 90 ntBASIC26.87■■□□□ 1.89
MBD4O95243 pRNA.5-201ENST00000612139 90 ntBASIC26.87■■□□□ 1.89
MBD4O95243 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.87■■□□□ 1.89
MBD4O95243 pRNA.11-201ENST00000618423 90 ntBASIC26.87■■□□□ 1.89
MBD4O95243 pRNA.13-201ENST00000619112 90 ntBASIC26.87■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms