Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
PCDH8O95206 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH8O95206 AC008764.7-201ENST00000593779 1081 ntBASIC22.5■■□□□ 1.19
PCDH8O95206 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.5■■□□□ 1.19
PCDH8O95206 pRNA.6-201ENST00000610482 90 ntBASIC22.5■■□□□ 1.19
PCDH8O95206 pRNA.5-201ENST00000612139 90 ntBASIC22.5■■□□□ 1.19
PCDH8O95206 pRNA.11-201ENST00000618423 90 ntBASIC22.5■■□□□ 1.19
PCDH8O95206 pRNA.13-201ENST00000619112 90 ntBASIC22.5■■□□□ 1.19
PCDH8O95206 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH8O95206 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH8O95206 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH8O95206 AC141586.4-201ENST00000624558 1573 ntBASIC22.5■■□□□ 1.19
PCDH8O95206 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH8O95206 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH8O95206 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH8O95206 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PCDH8O95206 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH8O95206 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH8O95206 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDH8O95206 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDH8O95206 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
PCDH8O95206 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH8O95206 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDH8O95206 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDH8O95206 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDH8O95206 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH8O95206 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH8O95206 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDH8O95206 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH8O95206 AC105265.2-201ENST00000467189 838 ntBASIC22.48■■□□□ 1.19
PCDH8O95206 AC091305.1-201ENST00000479476 895 ntBASIC22.48■■□□□ 1.19
PCDH8O95206 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.48■■□□□ 1.19
PCDH8O95206 AC136469.2-201ENST00000623944 1028 ntBASIC22.48■■□□□ 1.19
PCDH8O95206 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH8O95206 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH8O95206 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
PCDH8O95206 LINC00543-201ENST00000567234 1845 ntBASIC22.47■■□□□ 1.19
PCDH8O95206 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH8O95206 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH8O95206 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH8O95206 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH8O95206 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH8O95206 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH8O95206 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH8O95206 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH8O95206 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDH8O95206 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.47■■□□□ 1.19
PCDH8O95206 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDH8O95206 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PCDH8O95206 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH8O95206 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDH8O95206 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH8O95206 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH8O95206 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDH8O95206 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH8O95206 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH8O95206 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH8O95206 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH8O95206 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH8O95206 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH8O95206 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH8O95206 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH8O95206 AL139125.2-201ENST00000623134 1869 ntBASIC22.45■■□□□ 1.19
PCDH8O95206 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
PCDH8O95206 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH8O95206 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH8O95206 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH8O95206 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH8O95206 AC027682.1-201ENST00000562846 899 ntBASIC22.45■■□□□ 1.18
PCDH8O95206 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
PCDH8O95206 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.18
PCDH8O95206 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
PCDH8O95206 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH8O95206 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH8O95206 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
PCDH8O95206 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH8O95206 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
PCDH8O95206 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDH8O95206 RASA4CP-201ENST00000424092 1398 ntBASIC22.44■■□□□ 1.18
PCDH8O95206 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH8O95206 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDH8O95206 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDH8O95206 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.44■■□□□ 1.18
PCDH8O95206 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDH8O95206 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDH8O95206 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDH8O95206 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDH8O95206 CA15P2-201ENST00000611168 834 ntBASIC22.44■■□□□ 1.18
PCDH8O95206 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDH8O95206 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH8O95206 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH8O95206 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDH8O95206 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDH8O95206 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH8O95206 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH8O95206 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.43■■□□□ 1.18
PCDH8O95206 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH8O95206 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH8O95206 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH8O95206 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms