Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
SUPT3HO75486 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.18■■□□□ 1.14
SUPT3HO75486 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SUPT3HO75486 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SUPT3HO75486 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SUPT3HO75486 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SUPT3HO75486 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SUPT3HO75486 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SUPT3HO75486 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.18■■□□□ 1.14
SUPT3HO75486 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
SUPT3HO75486 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SUPT3HO75486 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SUPT3HO75486 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
SUPT3HO75486 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SUPT3HO75486 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SUPT3HO75486 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SUPT3HO75486 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
SUPT3HO75486 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
SUPT3HO75486 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
SUPT3HO75486 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SUPT3HO75486 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SUPT3HO75486 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SUPT3HO75486 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SUPT3HO75486 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.16■■□□□ 1.14
SUPT3HO75486 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
SUPT3HO75486 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
SUPT3HO75486 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SUPT3HO75486 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.16■■□□□ 1.14
SUPT3HO75486 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SUPT3HO75486 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SUPT3HO75486 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
SUPT3HO75486 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SUPT3HO75486 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SUPT3HO75486 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SUPT3HO75486 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SUPT3HO75486 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SUPT3HO75486 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SUPT3HO75486 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SUPT3HO75486 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SUPT3HO75486 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.14■■□□□ 1.14
SUPT3HO75486 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SUPT3HO75486 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SUPT3HO75486 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
SUPT3HO75486 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SUPT3HO75486 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SUPT3HO75486 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.14■■□□□ 1.13
SUPT3HO75486 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SUPT3HO75486 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.14■■□□□ 1.13
SUPT3HO75486 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SUPT3HO75486 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SUPT3HO75486 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
SUPT3HO75486 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SUPT3HO75486 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
SUPT3HO75486 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.13■■□□□ 1.13
SUPT3HO75486 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SUPT3HO75486 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SUPT3HO75486 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SUPT3HO75486 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SUPT3HO75486 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SUPT3HO75486 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SUPT3HO75486 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.12■■□□□ 1.13
SUPT3HO75486 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.12■■□□□ 1.13
SUPT3HO75486 AL031848.2-201ENST00000607670 837 ntBASIC22.12■■□□□ 1.13
SUPT3HO75486 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SUPT3HO75486 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SUPT3HO75486 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.12■■□□□ 1.13
SUPT3HO75486 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.12■■□□□ 1.13
SUPT3HO75486 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.11■■□□□ 1.13
SUPT3HO75486 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.11■■□□□ 1.13
SUPT3HO75486 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SUPT3HO75486 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SUPT3HO75486 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SUPT3HO75486 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.11■■□□□ 1.13
SUPT3HO75486 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
SUPT3HO75486 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.11■■□□□ 1.13
SUPT3HO75486 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SUPT3HO75486 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SUPT3HO75486 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SUPT3HO75486 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SUPT3HO75486 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SUPT3HO75486 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
SUPT3HO75486 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SUPT3HO75486 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SUPT3HO75486 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.1■■□□□ 1.13
SUPT3HO75486 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SUPT3HO75486 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.1■■□□□ 1.13
SUPT3HO75486 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SUPT3HO75486 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SUPT3HO75486 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SUPT3HO75486 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SUPT3HO75486 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.09■■□□□ 1.13
SUPT3HO75486 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SUPT3HO75486 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
SUPT3HO75486 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SUPT3HO75486 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SUPT3HO75486 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.09■■□□□ 1.13
SUPT3HO75486 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.09■■□□□ 1.13
SUPT3HO75486 SNX5-217ENST00000606557 1087 ntBASIC22.09■■□□□ 1.13
SUPT3HO75486 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SUPT3HO75486 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms