Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE3O75131 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE3O75131 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE3O75131 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE3O75131 AF213884.3-201ENST00000563833 479 ntBASIC21.5■■□□□ 1.03
CPNE3O75131 MIR4767-201ENST00000582827 78 ntBASIC21.5■■□□□ 1.03
CPNE3O75131 AC011298.3-201ENST00000615796 283 ntBASIC21.5■■□□□ 1.03
CPNE3O75131 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE3O75131 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE3O75131 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CPNE3O75131 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE3O75131 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE3O75131 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.49■■□□□ 1.03
CPNE3O75131 ZNRF2P3-201ENST00000424200 374 ntBASIC21.49■■□□□ 1.03
CPNE3O75131 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CPNE3O75131 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.49■■□□□ 1.03
CPNE3O75131 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE3O75131 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE3O75131 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE3O75131 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE3O75131 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
CPNE3O75131 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE3O75131 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.48■■□□□ 1.03
CPNE3O75131 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE3O75131 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.48■■□□□ 1.03
CPNE3O75131 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE3O75131 AP001330.3-201ENST00000520123 633 ntBASIC21.48■■□□□ 1.03
CPNE3O75131 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE3O75131 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CPNE3O75131 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE3O75131 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE3O75131 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE3O75131 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE3O75131 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE3O75131 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE3O75131 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CPNE3O75131 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE3O75131 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE3O75131 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE3O75131 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE3O75131 MIR939-201ENST00000401314 82 ntBASIC21.47■■□□□ 1.03
CPNE3O75131 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.47■■□□□ 1.03
CPNE3O75131 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE3O75131 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.47■■□□□ 1.03
CPNE3O75131 AL136967.2-201ENST00000623968 743 ntBASIC21.47■■□□□ 1.03
CPNE3O75131 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CPNE3O75131 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.47■■□□□ 1.03
CPNE3O75131 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE3O75131 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE3O75131 AC142381.3-201ENST00000568208 1670 ntBASIC21.47■■□□□ 1.03
CPNE3O75131 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CPNE3O75131 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE3O75131 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE3O75131 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CPNE3O75131 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE3O75131 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.46■■□□□ 1.03
CPNE3O75131 AC091305.1-201ENST00000479476 895 ntBASIC21.46■■□□□ 1.03
CPNE3O75131 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.46■■□□□ 1.03
CPNE3O75131 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.46■■□□□ 1.03
CPNE3O75131 AC009086.3-201ENST00000623486 1008 ntBASIC21.46■■□□□ 1.03
CPNE3O75131 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE3O75131 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CPNE3O75131 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CPNE3O75131 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.46■■□□□ 1.03
CPNE3O75131 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE3O75131 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.45■■□□□ 1.02
CPNE3O75131 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPNE3O75131 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.45■■□□□ 1.02
CPNE3O75131 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.45■■□□□ 1.02
CPNE3O75131 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CPNE3O75131 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
CPNE3O75131 AC105265.2-201ENST00000467189 838 ntBASIC21.44■■□□□ 1.02
CPNE3O75131 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.44■■□□□ 1.02
CPNE3O75131 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.44■■□□□ 1.02
CPNE3O75131 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPNE3O75131 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.43■■□□□ 1.02
CPNE3O75131 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPNE3O75131 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CPNE3O75131 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPNE3O75131 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.43■■□□□ 1.02
CPNE3O75131 AC027682.1-201ENST00000562846 899 ntBASIC21.43■■□□□ 1.02
CPNE3O75131 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.43■■□□□ 1.02
CPNE3O75131 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.43■■□□□ 1.02
CPNE3O75131 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CPNE3O75131 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPNE3O75131 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPNE3O75131 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CPNE3O75131 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPNE3O75131 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CPNE3O75131 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.42■■□□□ 1.02
CPNE3O75131 AC006455.2-201ENST00000429931 906 ntBASIC21.42■■□□□ 1.02
CPNE3O75131 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.42■■□□□ 1.02
CPNE3O75131 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.42■■□□□ 1.02
CPNE3O75131 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPNE3O75131 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.42■■□□□ 1.02
CPNE3O75131 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.42■■□□□ 1.02
CPNE3O75131 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.42■■□□□ 1.02
CPNE3O75131 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CPNE3O75131 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.42■■□□□ 1.02
CPNE3O75131 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms