Protein–RNA interactions for Protein: O60882

MMP20, Matrix metalloproteinase-20, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP20O60882 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.46■■□□□ 1.19
MMP20O60882 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
MMP20O60882 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.46■■□□□ 1.19
MMP20O60882 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
MMP20O60882 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
MMP20O60882 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
MMP20O60882 EDA-201ENST00000338901 1233 ntBASIC22.45■■□□□ 1.18
MMP20O60882 SUDS3P1-201ENST00000505831 966 ntBASIC22.45■■□□□ 1.18
MMP20O60882 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.45■■□□□ 1.18
MMP20O60882 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.45■■□□□ 1.18
MMP20O60882 AL355001.2-201ENST00000620617 1191 ntBASIC22.45■■□□□ 1.18
MMP20O60882 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MMP20O60882 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
MMP20O60882 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.45■■□□□ 1.18
MMP20O60882 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
MMP20O60882 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
MMP20O60882 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MMP20O60882 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
MMP20O60882 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
MMP20O60882 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
MMP20O60882 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
MMP20O60882 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
MMP20O60882 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
MMP20O60882 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
MMP20O60882 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
MMP20O60882 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
MMP20O60882 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.44■■□□□ 1.18
MMP20O60882 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.44■■□□□ 1.18
MMP20O60882 MIR3181-201ENST00000578512 73 ntBASIC22.44■■□□□ 1.18
MMP20O60882 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
MMP20O60882 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.44■■□□□ 1.18
MMP20O60882 AL138724.1-201ENST00000606771 1088 ntBASIC22.44■■□□□ 1.18
MMP20O60882 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
MMP20O60882 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
MMP20O60882 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.44■■□□□ 1.18
MMP20O60882 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
MMP20O60882 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
MMP20O60882 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.43■■□□□ 1.18
MMP20O60882 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.43■■□□□ 1.18
MMP20O60882 pRNA.6-201ENST00000610482 90 ntBASIC22.43■■□□□ 1.18
MMP20O60882 pRNA.5-201ENST00000612139 90 ntBASIC22.43■■□□□ 1.18
MMP20O60882 AC011298.3-201ENST00000615796 283 ntBASIC22.43■■□□□ 1.18
MMP20O60882 pRNA.11-201ENST00000618423 90 ntBASIC22.43■■□□□ 1.18
MMP20O60882 pRNA.13-201ENST00000619112 90 ntBASIC22.43■■□□□ 1.18
MMP20O60882 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.43■■□□□ 1.18
MMP20O60882 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
MMP20O60882 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
MMP20O60882 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
MMP20O60882 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
MMP20O60882 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
MMP20O60882 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.42■■□□□ 1.18
MMP20O60882 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
MMP20O60882 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
MMP20O60882 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.42■■□□□ 1.18
MMP20O60882 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MMP20O60882 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MMP20O60882 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
MMP20O60882 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MMP20O60882 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.41■■□□□ 1.18
MMP20O60882 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MMP20O60882 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.4■■□□□ 1.18
MMP20O60882 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MMP20O60882 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.4■■□□□ 1.18
MMP20O60882 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.4■■□□□ 1.18
MMP20O60882 AF213884.3-201ENST00000563833 479 ntBASIC22.4■■□□□ 1.18
MMP20O60882 AL136967.2-201ENST00000623968 743 ntBASIC22.4■■□□□ 1.18
MMP20O60882 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
MMP20O60882 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
MMP20O60882 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MMP20O60882 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
MMP20O60882 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MMP20O60882 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MMP20O60882 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
MMP20O60882 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
MMP20O60882 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.39■■□□□ 1.17
MMP20O60882 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.39■■□□□ 1.17
MMP20O60882 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.39■■□□□ 1.17
MMP20O60882 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
MMP20O60882 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
MMP20O60882 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
MMP20O60882 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
MMP20O60882 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
MMP20O60882 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
MMP20O60882 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.38■■□□□ 1.17
MMP20O60882 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.38■■□□□ 1.17
MMP20O60882 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.38■■□□□ 1.17
MMP20O60882 AC136469.2-201ENST00000623944 1028 ntBASIC22.38■■□□□ 1.17
MMP20O60882 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
MMP20O60882 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
MMP20O60882 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
MMP20O60882 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
MMP20O60882 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MMP20O60882 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
MMP20O60882 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.37■■□□□ 1.17
MMP20O60882 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.37■■□□□ 1.17
MMP20O60882 AP001330.3-201ENST00000520123 633 ntBASIC22.37■■□□□ 1.17
MMP20O60882 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
MMP20O60882 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
MMP20O60882 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MMP20O60882 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms